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Aliases for CPHL1P Gene

Aliases for CPHL1P Gene

  • Ceruloplasmin And Hephaestin-Like 1 Pseudogene 2 3 5
  • Ceruloplasmin And Hephaestin-Like 1 2
  • CPHL1 3

External Ids for CPHL1P Gene

Previous HGNC Symbols for CPHL1P Gene

  • CPHL1

Previous GeneCards Identifiers for CPHL1P Gene

  • GC03M146330
  • GC03M148949

Summaries for CPHL1P Gene

GeneCards Summary for CPHL1P Gene

CPHL1P (Ceruloplasmin And Hephaestin-Like 1 Pseudogene) is a Pseudogene.

Additional gene information for CPHL1P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CPHL1P Gene

Genomics for CPHL1P Gene

GeneHancer (GH) Regulatory Elements for CPHL1P Gene

Promoters and enhancers for CPHL1P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J149291 Enhancer 0.5 dbSUPER 655.2 -0.2 -249 1.5 CTCF SMC3 ZNF444 RAD21 CPHL1P TM4SF18 ENSG00000244468
GH03J149128 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 5.5 +160.8 160787 4.4 PKNOX1 MLX ARID4B SIN3A DMAP1 YY1 ZNF207 ZNF143 SP3 SP5 HPS3 COMMD2 HLTF TM4SF18 CPHL1P GC03M149173
GH03J149276 Enhancer 1.2 Ensembl ENCODE dbSUPER 9 +14.5 14505 2 ELF3 FOXA2 ARID4B SIN3A ZBTB40 RAD21 YY1 EGR1 FOS RUNX3 CPHL1P ENSG00000244468 LOC101927942
GH03J149280 Enhancer 0.7 ENCODE dbSUPER 10.1 +10.0 9967 2.6 JUND GATA3 ZFX MAFK TM4SF18 CPHL1P WWTR1 ENSG00000244468 LOC101927942
GH03J149278 Enhancer 0.4 ENCODE dbSUPER 8.8 +12.6 12585 1.3 CPHL1P ENSG00000244468 LOC101927942
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CPHL1P on UCSC Golden Path with GeneCards custom track

Genomic Locations for CPHL1P Gene

Genomic Locations for CPHL1P Gene
chr3:149,229,356-149,291,800
(GRCh38/hg38)
Size:
62,445 bases
Orientation:
Minus strand
chr3:148,947,143-149,009,587
(GRCh37/hg19)
Size:
62,445 bases
Orientation:
Minus strand

Genomic View for CPHL1P Gene

Genes around CPHL1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CPHL1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CPHL1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CPHL1P Gene

Function for CPHL1P Gene

Phenotypes From GWAS Catalog for CPHL1P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CPHL1P Gene

Localization for CPHL1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CPHL1P Gene

Pathways & Interactions for CPHL1P Gene

SuperPathways for CPHL1P Gene

No Data Available

Interacting Proteins for CPHL1P Gene

Gene Ontology (GO) - Biological Process for CPHL1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CPHL1P Gene

Drugs & Compounds for CPHL1P Gene

No Compound Related Data Available

Transcripts for CPHL1P Gene

mRNA/cDNA for CPHL1P Gene

(13) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CPHL1P Gene

No ASD Table

Relevant External Links for CPHL1P Gene

GeneLoc Exon Structure for
CPHL1P
ECgene alternative splicing isoforms for
CPHL1P

Expression for CPHL1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CPHL1P Gene

mRNA differential expression in normal tissues according to GTEx for CPHL1P Gene

This gene is overexpressed in Breast - Mammary Tissue (x32.3) and Testis (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of CPHL1P Gene:

CPHL1P
genes like me logo Genes that share expression patterns with CPHL1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CPHL1P Gene

Orthologs for CPHL1P Gene

Evolution for CPHL1P Gene

ENSEMBL:
Gene Tree for CPHL1P (if available)
TreeFam:
Gene Tree for CPHL1P (if available)

No data available for Orthologs for CPHL1P Gene

Paralogs for CPHL1P Gene

No data available for Paralogs for CPHL1P Gene

Variants for CPHL1P Gene

Additional Variant Information for CPHL1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CPHL1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CPHL1P Gene

Disorders for CPHL1P Gene

No disorders were found for CPHL1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CPHL1P Gene

Publications for CPHL1P Gene

  1. Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women. (PMID: 22589738) Fox CS … Borecki IB (PLoS genetics 2012) 3 58
  2. A third approach to gene prediction suggests thousands of additional human transcribed regions. (PMID: 16543943) Glusman G … Smit AF (PLoS computational biology 2006) 3 58
  3. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3 58

Products for CPHL1P Gene

Sources for CPHL1P Gene

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