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Aliases for CPEB2-AS1 Gene

Subcategory (RNA class) for CPEB2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for CPEB2-AS1 Gene

  • CPEB2 Antisense RNA 1 (Head To Head) 2 3 5

External Ids for CPEB2-AS1 Gene

Summaries for CPEB2-AS1 Gene

GeneCards Summary for CPEB2-AS1 Gene

CPEB2-AS1 (CPEB2 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CPEB2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CPEB2-AS1 Gene

Genomics for CPEB2-AS1 Gene

GeneHancer (GH) Regulatory Elements for CPEB2-AS1 Gene

Promoters and enhancers for CPEB2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I015000 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 557.5 -1.7 -1669 6.2 HDGF PKNOX1 FOXA2 ARID4B SIN3A DMAP1 YY1 POLR2B ZNF766 E2F8 CPEB2 CPEB2-AS1 LINC00504 RN7SKP170 GC04M015093 LOC101929095
GH04I015078 Enhancer 0.9 Ensembl ENCODE 7 -76.6 -76555 1.2 FOXA2 JUN MAX CEBPG RAD21 RFX5 YY1 RCOR1 TRIM24 ATF7 CPEB2-AS1 LINC00504 RN7SKP170 GC04M015093 CPEB2 LOC101929095
GH04I015040 Enhancer 0.5 dbSUPER 7.1 -39.9 -39884 3.3 CTCF JUND GATA3 JUN FOS RAD21 LINC00504 CPEB2-AS1 CPEB2 RN7SKP170 GC04M015093 LOC101929095
GH04I015019 Enhancer 0.5 dbSUPER 7.1 -18.9 -18914 3.5 IKZF1 ATF7 EBF1 IKZF2 SPI1 LINC00504 CPEB2-AS1 CPEB2 RN7SKP170 GC04M015093 LOC101929095
GH04I015013 Enhancer 0.4 Ensembl dbSUPER 7.2 -11.9 -11856 1 CPEB2-AS1 CPEB2 RN7SKP170 GC04M015093 LOC101929095
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CPEB2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CPEB2-AS1 Gene

Genomic Locations for CPEB2-AS1 Gene
92,085 bases
Minus strand

Genomic View for CPEB2-AS1 Gene

Genes around CPEB2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CPEB2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CPEB2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CPEB2-AS1 Gene

Proteins for CPEB2-AS1 Gene

Post-translational modifications for CPEB2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CPEB2-AS1 Gene

Domains & Families for CPEB2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CPEB2-AS1 Gene

Function for CPEB2-AS1 Gene

Phenotypes From GWAS Catalog for CPEB2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CPEB2-AS1 Gene

Localization for CPEB2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CPEB2-AS1 Gene

Pathways & Interactions for CPEB2-AS1 Gene

SuperPathways for CPEB2-AS1 Gene

No Data Available

Interacting Proteins for CPEB2-AS1 Gene

Gene Ontology (GO) - Biological Process for CPEB2-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for CPEB2-AS1 Gene

Drugs & Compounds for CPEB2-AS1 Gene

No Compound Related Data Available

Transcripts for CPEB2-AS1 Gene

mRNA/cDNA for CPEB2-AS1 Gene

(10) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CPEB2-AS1 Gene

No ASD Table

Relevant External Links for CPEB2-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CPEB2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CPEB2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CPEB2-AS1 Gene

This gene is overexpressed in Testis (x30.7).
genes like me logo Genes that share expression patterns with CPEB2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CPEB2-AS1 Gene

Orthologs for CPEB2-AS1 Gene

Evolution for CPEB2-AS1 Gene

Gene Tree for CPEB2-AS1 (if available)
Gene Tree for CPEB2-AS1 (if available)

No data available for Orthologs for CPEB2-AS1 Gene

Paralogs for CPEB2-AS1 Gene

No data available for Paralogs for CPEB2-AS1 Gene

Variants for CPEB2-AS1 Gene

Sequence variations from dbSNP and Humsavar for CPEB2-AS1 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000016575 -- 14,980,082(-) T/C intron_variant
rs1000031595 -- 14,974,111(-) A/T intron_variant
rs1000057153 -- 14,958,540(-) C/A intron_variant
rs1000065579 -- 14,934,140(-) T/A intron_variant
rs1000072821 -- 14,943,366(-) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for CPEB2-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv105e19 CNV gain 19470904
esv1009627 CNV insertion 20482838
esv1205571 CNV insertion 17803354
esv1232943 CNV deletion 17803354
esv1492264 CNV deletion 17803354
esv1516048 CNV insertion 17803354
esv2727210 CNV deletion 23290073
esv2727211 CNV deletion 23290073
esv2727212 CNV deletion 23290073
esv29275 CNV loss 19812545
esv3328411 CNV insertion 20981092
esv3360212 CNV duplication 20981092
esv3364270 CNV duplication 20981092
esv3563458 CNV deletion 23714750
esv991701 CNV insertion 20482838
nsv1073739 CNV deletion 25765185
nsv1074694 CNV deletion 25765185
nsv1128886 CNV duplication 24896259
nsv1136819 CNV deletion 24896259
nsv1153142 CNV deletion 26484159
nsv1161060 CNV deletion 26073780
nsv1161061 CNV deletion 26073780
nsv292436 CNV insertion 16902084
nsv4244 CNV insertion 18451855
nsv461280 CNV loss 19166990
nsv471837 CNV novel sequence insertion 20440878
nsv480896 CNV novel sequence insertion 20440878
nsv508998 CNV insertion 20534489
nsv508999 CNV insertion 20534489
nsv593756 CNV loss 21841781
nsv593757 CNV loss 21841781
nsv593758 CNV gain 21841781
nsv593759 CNV loss 21841781
nsv593760 CNV gain 21841781
nsv829868 CNV gain 17160897
nsv954414 CNV deletion 24416366

Additional Variant Information for CPEB2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CPEB2-AS1 Gene

Disorders for CPEB2-AS1 Gene

Additional Disease Information for CPEB2-AS1

No disorders were found for CPEB2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CPEB2-AS1 Gene

Publications for CPEB2-AS1 Gene

  1. Genetic influences on political ideologies: twin analyses of 19 measures of political ideologies from five democracies and genome-wide findings from three populations. (PMID: 24569950) Hatemi PK … Martin NG (Behavior genetics 2014) 3 58
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for CPEB2-AS1 Gene

Sources for CPEB2-AS1 Gene

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