Aliases for COX6CP5 Gene

Aliases for COX6CP5 Gene

  • Cytochrome C Oxidase Subunit 6C Pseudogene 5 2 3 5
  • Cytochrome C Oxidase Subunit VIc Pseudogene 5 2 3
  • COX6CP5 5

External Ids for COX6CP5 Gene

Previous GeneCards Identifiers for COX6CP5 Gene

  • GC00U933859
  • GC11P008001

Summaries for COX6CP5 Gene

GeneCards Summary for COX6CP5 Gene

COX6CP5 (Cytochrome C Oxidase Subunit 6C Pseudogene 5) is a Pseudogene.

Additional gene information for COX6CP5 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for COX6CP5 Gene

Genomics for COX6CP5 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for COX6CP5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J007974 Enhancer 1.1 Ensembl ENCODE dbSUPER 600.7 -0.5 -497 4.4 JUND ZNF24 DPF2 HDAC1 CEBPB ZNF766 CTBP1 BRCA1 NFE2 JUN COX6CP5 lnc-TUB-5 EIF3F OR10A3 CASC23 TUB OVCH2 lnc-NLRP10-2
GH11J007985 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 +10.0 10048 3.3 SP1 CREB1 GATAD2A CTCF TEAD4 PRDM10 ZNF629 SIX5 LEF1 IKZF1 EIF3F OLFML1 SNORA3B TMEM9B-AS1 RPL27A DENND2B CASC23 TUB ENSG00000254921 ZNF214
GH11J007973 Enhancer 0.3 ENCODE 0.7 -4.4 -4372 0.2 JUND lnc-NLRP10-2 OR10A3 CASC23 TUB EIF3F COX6CP5 lnc-TUB-5
GH11J007989 Promoter 0.3 Ensembl 0.4 +12.0 12020 0.2 EIF3F CASC23 TUB ENSG00000254921 piR-34916-001 COX6CP5 lnc-TUB-5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around COX6CP5 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for COX6CP5 Gene

Genomic Locations for COX6CP5 Gene
chr11:7,977,481-7,977,708
(GRCh38/hg38)
Size:
228 bases
Orientation:
Plus strand
chr11:7,999,028-7,999,255
(GRCh37/hg19)
Size:
228 bases
Orientation:
Plus strand

Genomic View for COX6CP5 Gene

Genes around COX6CP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
COX6CP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for COX6CP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for COX6CP5 Gene

Proteins for COX6CP5 Gene

Post-translational modifications for COX6CP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for COX6CP5 Gene

Domains & Families for COX6CP5 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for COX6CP5 Gene

Function for COX6CP5 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for COX6CP5 Gene

Localization for COX6CP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for COX6CP5 Gene

Pathways & Interactions for COX6CP5 Gene

PathCards logo

SuperPathways for COX6CP5 Gene

No Data Available

Gene Ontology (GO) - Biological Process for COX6CP5 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for COX6CP5 Gene

Drugs & Compounds for COX6CP5 Gene

No Compound Related Data Available

Transcripts for COX6CP5 Gene

mRNA/cDNA for COX6CP5 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for COX6CP5 Gene

No ASD Table

Relevant External Links for COX6CP5 Gene

GeneLoc Exon Structure for
COX6CP5

Expression for COX6CP5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for COX6CP5 Gene

genes like me logo Genes that share expression patterns with COX6CP5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for COX6CP5 Gene

Orthologs for COX6CP5 Gene

Evolution for COX6CP5 Gene

ENSEMBL:
Gene Tree for COX6CP5 (if available)
TreeFam:
Gene Tree for COX6CP5 (if available)

No data available for Orthologs for COX6CP5 Gene

Paralogs for COX6CP5 Gene

No data available for Paralogs for COX6CP5 Gene

Variants for COX6CP5 Gene

Additional Variant Information for COX6CP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
COX6CP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for COX6CP5 Gene

Disorders for COX6CP5 Gene

No disorders were found for COX6CP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for COX6CP5 Gene

Publications for COX6CP5 Gene

No publications were found for COX6CP5 Gene.

No data available for Mastermind for COX6CP5 Gene

Products for COX6CP5 Gene

Sources for COX6CP5 Gene