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Aliases for COX6CP18 Gene

Subcategory (RNA class) for COX6CP18 Gene

lncRNA

Aliases for COX6CP18 Gene

  • Cytochrome C Oxidase Subunit 6C Pseudogene 18 2 3 5
  • Cytochrome C Oxidase Subunit VIc Pseudogene 18 2 3

External Ids for COX6CP18 Gene

ORGUL Members for COX6CP18 Gene

Previous GeneCards Identifiers for COX6CP18 Gene

  • GC00U936013

Summaries for COX6CP18 Gene

GeneCards Summary for COX6CP18 Gene

COX6CP18 (Cytochrome C Oxidase Subunit 6C Pseudogene 18) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for COX6CP18 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for COX6CP18 Gene

Genomics for COX6CP18 Gene

GeneHancer (GH) Regulatory Elements for COX6CP18 Gene

Promoters and enhancers for COX6CP18 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J002777 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.3 8323 5.3 CC2D1A ZFX ZKSCAN8 CBFA2T2 ZNF148 MLLT1 GTF2F1 TRIM24 ZNF639 SMARCA4 KCNQ1-AS1 KCNQ1DN KCNQ1 CDKN1C COX6CP18
GH11J002768 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.7 -2.0 -2019 1.1 SMARCA4 GLIS2 PATZ1 SMARCC1 ZNF585B JUN JUND FOS FOSL1 FOSL2 KCNQ1OT1 CDKN1C COX6CP18 KCNQ1
GH11J002724 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -43.0 -42960 7.6 ELF3 RERE TFE3 HNF1A PPARG SP5 KAT8 HMG20B SOX13 PRDM10 KCNQ1OT1 KCNQ1DN TSSC4 COX6CP18 KCNQ1
GH11J002696 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -69.8 -69783 10.2 SP1 ZFX ELF3 MNT ZNF148 NKRF POLR2A MLLT1 GTF2F1 ZNF687 KCNQ1OT1 TSSC4 OSBPL5 ENSG00000235027 KCNQ1 TRPM5 ENSG00000276015 COX6CP18
GH11J002736 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -31.4 -31355 7.6 ZFX CBFA2T2 ZNF148 TRIM24 IKZF1 SOX13 ZIC2 PKNOX1 MNT EP300 TSSC4 KCNQ1OT1 COX6CP18 KCNQ1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around COX6CP18 on UCSC Golden Path with GeneCards custom track

Genomic Locations for COX6CP18 Gene

Genomic Locations for COX6CP18 Gene
chr11:2,771,356-2,771,577
(GRCh38/hg38)
Size:
222 bases
Orientation:
Plus strand

Genomic View for COX6CP18 Gene

Genes around COX6CP18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
COX6CP18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for COX6CP18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for COX6CP18 Gene

Proteins for COX6CP18 Gene

Post-translational modifications for COX6CP18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for COX6CP18 Gene

Domains & Families for COX6CP18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for COX6CP18 Gene

Function for COX6CP18 Gene

Phenotypes From GWAS Catalog for COX6CP18 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for COX6CP18 Gene

Localization for COX6CP18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for COX6CP18 Gene

Pathways & Interactions for COX6CP18 Gene

PathCards logo

SuperPathways for COX6CP18 Gene

No Data Available

Interacting Proteins for COX6CP18 Gene

Gene Ontology (GO) - Biological Process for COX6CP18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for COX6CP18 Gene

Drugs & Compounds for COX6CP18 Gene

No Compound Related Data Available

Transcripts for COX6CP18 Gene

mRNA/cDNA for COX6CP18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for COX6CP18 Gene

No ASD Table

Relevant External Links for COX6CP18 Gene

GeneLoc Exon Structure for
COX6CP18
ECgene alternative splicing isoforms for
COX6CP18

Expression for COX6CP18 Gene

NURSA nuclear receptor signaling pathways regulating expression of COX6CP18 Gene:

COX6CP18
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for COX6CP18 Gene

Orthologs for COX6CP18 Gene

Evolution for COX6CP18 Gene

ENSEMBL:
Gene Tree for COX6CP18 (if available)
TreeFam:
Gene Tree for COX6CP18 (if available)

No data available for Orthologs for COX6CP18 Gene

Paralogs for COX6CP18 Gene

No data available for Paralogs for COX6CP18 Gene

Variants for COX6CP18 Gene

Additional Variant Information for COX6CP18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
COX6CP18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for COX6CP18 Gene

Disorders for COX6CP18 Gene

No disorders were found for COX6CP18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for COX6CP18 Gene

Publications for COX6CP18 Gene

No publications were found for COX6CP18 Gene.

No data available for External Links for COX6CP18 Gene

Products for COX6CP18 Gene

Sources for COX6CP18 Gene

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