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Aliases for COX6CP16 Gene

Subcategory (RNA class) for COX6CP16 Gene

lncRNA

Aliases for COX6CP16 Gene

  • Cytochrome C Oxidase Subunit 6C Pseudogene 16 2 3 5
  • Cytochrome C Oxidase Subunit VIc Pseudogene 16 2

External Ids for COX6CP16 Gene

ORGUL Members for COX6CP16 Gene

Previous GeneCards Identifiers for COX6CP16 Gene

  • GC00U934728

Summaries for COX6CP16 Gene

GeneCards Summary for COX6CP16 Gene

COX6CP16 (Cytochrome C Oxidase Subunit 6C Pseudogene 16) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for COX6CP16 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for COX6CP16 Gene

Genomics for COX6CP16 Gene

GeneHancer (GH) Regulatory Elements for COX6CP16 Gene

Promoters and enhancers for COX6CP16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I085280 Enhancer 0.7 ENCODE dbSUPER 550.8 -1.1 -1075 0.2 NFIC POLR2A ZIC2 NR2F2 COX6CP16 LINC00311 GSE1
GH16I085278 Enhancer 0.5 ENCODE dbSUPER 550.8 +0.1 65 0.2 RXRA COX6CP16 PIR44306 GSE1
GH16I085276 Enhancer 0.3 dbSUPER 550.8 +1.5 1462 1.9 ZBTB33 COX6CP16 PIR44306 GSE1
GH16I085275 Enhancer 1.1 ENCODE dbSUPER 0.8 +3.2 3235 0.2 ELF3 RB1 MLX ARID4B SIN3A NFXL1 ZNF48 RAD21 RARA GLIS2 COX6CP16 PIR44306 GSE1
GH16I085233 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.3 +43.4 43427 3.9 HDGF PKNOX1 ZFP64 ARID4B ZNF2 ZNF48 GLIS2 ZNF143 KLF7 RUNX3 ENSG00000261243 ENSG00000270184 TLDC1 PIR44306 COX6CP16 GSE1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around COX6CP16 on UCSC Golden Path with GeneCards custom track

Genomic Locations for COX6CP16 Gene

Genomic Locations for COX6CP16 Gene
chr16:85,278,820-85,279,035
(GRCh38/hg38)
Size:
216 bases
Orientation:
Minus strand

Genomic View for COX6CP16 Gene

Genes around COX6CP16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
COX6CP16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for COX6CP16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for COX6CP16 Gene

Proteins for COX6CP16 Gene

Post-translational modifications for COX6CP16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for COX6CP16 Gene

Domains & Families for COX6CP16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for COX6CP16 Gene

Function for COX6CP16 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for COX6CP16 Gene

Localization for COX6CP16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for COX6CP16 Gene

Pathways & Interactions for COX6CP16 Gene

SuperPathways for COX6CP16 Gene

No Data Available

Interacting Proteins for COX6CP16 Gene

Gene Ontology (GO) - Biological Process for COX6CP16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for COX6CP16 Gene

Drugs & Compounds for COX6CP16 Gene

No Compound Related Data Available

Transcripts for COX6CP16 Gene

mRNA/cDNA for COX6CP16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for COX6CP16 Gene

No ASD Table

Relevant External Links for COX6CP16 Gene

GeneLoc Exon Structure for
COX6CP16
ECgene alternative splicing isoforms for
COX6CP16

Expression for COX6CP16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for COX6CP16 Gene

NURSA nuclear receptor signaling pathways regulating expression of COX6CP16 Gene:

COX6CP16
genes like me logo Genes that share expression patterns with COX6CP16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for COX6CP16 Gene

Orthologs for COX6CP16 Gene

Evolution for COX6CP16 Gene

ENSEMBL:
Gene Tree for COX6CP16 (if available)
TreeFam:
Gene Tree for COX6CP16 (if available)

No data available for Orthologs for COX6CP16 Gene

Paralogs for COX6CP16 Gene

No data available for Paralogs for COX6CP16 Gene

Variants for COX6CP16 Gene

Additional Variant Information for COX6CP16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
COX6CP16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for COX6CP16 Gene

Disorders for COX6CP16 Gene

No disorders were found for COX6CP16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for COX6CP16 Gene

Publications for COX6CP16 Gene

No publications were found for COX6CP16 Gene.

Products for COX6CP16 Gene

Sources for COX6CP16 Gene

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