Aliases for COX5BP2 Gene

Aliases for COX5BP2 Gene

  • Cytochrome C Oxidase Subunit 5B Pseudogene 2 2 3 5
  • Cytochrome C Oxidase Subunit Vb Pseudogene 2 2 3
  • Cytochrome C Oxidase Subunit Vb-Like 2 2 3
  • COX5BL2 3

External Ids for COX5BP2 Gene

Previous HGNC Symbols for COX5BP2 Gene

  • COX5BL2

Previous GeneCards Identifiers for COX5BP2 Gene

  • GC06U902120
  • GC06M136356

Summaries for COX5BP2 Gene

GeneCards Summary for COX5BP2 Gene

COX5BP2 (Cytochrome C Oxidase Subunit 5B Pseudogene 2) is a Pseudogene.

Additional gene information for COX5BP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for COX5BP2 Gene

Genomics for COX5BP2 Gene

GeneHancer (GH) Regulatory Elements for COX5BP2 Gene

Promoters and enhancers for COX5BP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J136035 Enhancer 0.5 ENCODE dbSUPER 500.7 -0.6 -612 0.2 NR2F2 FOS COX5BP2 LOC644135 ENSG00000237596 PDE7B
GH06J136033 Enhancer 0.3 Ensembl dbSUPER 500.7 +1.2 1185 0.6 COX5BP2 L13713-213 LOC644135 ENSG00000237596 PDE7B
GH06J136036 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 -3.7 -3738 5.6 TCF12 CTCF NR2F2 GATA3 CEBPB FOS RXRA GATA2 JUN POLR2A PDE7B COX5BP2 LOC644135 ENSG00000237596
GH06J136049 Enhancer 1.2 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -16.0 -16025 3.4 NR2F2 MAFK POLR2A TAF1 GATA2 JUN COX5BP2 LOC644135 ENSG00000237596 PDE7B
GH06J136067 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -32.9 -32915 5.6 FOS TEAD4 CLOCK EP300 SMARCC1 CEBPB JUN STAT3 JUND MAX COX5BP2 LOC644135 ENSG00000237596 PDE7B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around COX5BP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for COX5BP2 Gene

Genomic Locations for COX5BP2 Gene
chr6:136,034,515-136,034,886
(GRCh38/hg38)
Size:
372 bases
Orientation:
Minus strand
chr6:136,355,169-136,356,293
(GRCh37/hg19)
Size:
1,125 bases
Orientation:
Minus strand

Genomic View for COX5BP2 Gene

Genes around COX5BP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
COX5BP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for COX5BP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for COX5BP2 Gene

Proteins for COX5BP2 Gene

Post-translational modifications for COX5BP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for COX5BP2 Gene

Domains & Families for COX5BP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for COX5BP2 Gene

Function for COX5BP2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for COX5BP2 Gene

Localization for COX5BP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for COX5BP2 Gene

Pathways & Interactions for COX5BP2 Gene

PathCards logo

SuperPathways for COX5BP2 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for COX5BP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for COX5BP2 Gene

Drugs & Compounds for COX5BP2 Gene

No Compound Related Data Available

Transcripts for COX5BP2 Gene

mRNA/cDNA for COX5BP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for COX5BP2 Gene

No ASD Table

Relevant External Links for COX5BP2 Gene

GeneLoc Exon Structure for
COX5BP2

Expression for COX5BP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for COX5BP2 Gene

mRNA differential expression in normal tissues according to GTEx for COX5BP2 Gene

This gene is overexpressed in Liver (x10.5) and Heart - Atrial Appendage (x6.4).
genes like me logo Genes that share expression patterns with COX5BP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for COX5BP2 Gene

Orthologs for COX5BP2 Gene

Evolution for COX5BP2 Gene

ENSEMBL:
Gene Tree for COX5BP2 (if available)
TreeFam:
Gene Tree for COX5BP2 (if available)

No data available for Orthologs for COX5BP2 Gene

Paralogs for COX5BP2 Gene

No data available for Paralogs for COX5BP2 Gene

Variants for COX5BP2 Gene

Additional Variant Information for COX5BP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
COX5BP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for COX5BP2 Gene

Disorders for COX5BP2 Gene

No disorders were found for COX5BP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for COX5BP2 Gene

Publications for COX5BP2 Gene

No publications were found for COX5BP2 Gene.

Products for COX5BP2 Gene

Sources for COX5BP2 Gene