Free for academic non-profit institutions. Other users need a Commercial license

Aliases for COX20P2 Gene

Aliases for COX20P2 Gene

  • COX20, Cytochrome C Oxidase Assembly Factor Pseudogene 2 2 3 5
  • COX20 Cytochrome C Oxidase Assembly Factor Pseudogene 2 2
  • COX20 Pseudogene 2 2

External Ids for COX20P2 Gene

Previous GeneCards Identifiers for COX20P2 Gene

  • GC02P231813

Summaries for COX20P2 Gene

GeneCards Summary for COX20P2 Gene

COX20P2 (COX20, Cytochrome C Oxidase Assembly Factor Pseudogene 2) is a Pseudogene.

Additional gene information for COX20P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for COX20P2 Gene

Genomics for COX20P2 Gene

GeneHancer (GH) Regulatory Elements for COX20P2 Gene

Promoters and enhancers for COX20P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I230956 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 550.8 -0.2 -243 1.6 PKNOX1 SMAD1 RB1 BMI1 BATF KLF5 IRF4 ZNF335 ZNF366 ATF7 COX20P2 GPR55 GC02M230912
GH02I230953 Enhancer 1 FANTOM5 dbSUPER 0.8 -3.5 -3517 0.4 HDGF BACH1 EBF1 BATF RELA POLR2A NFATC1 ETV6 IKZF2 RUNX3 SPATA3-AS1 SPATA3 ENSG00000230385 PSMD1 GPR55 COX20P2 GC02M230912
GH02I230943 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.4 -13390 1.4 HDGF PKNOX1 BMI1 BATF IRF4 ZNF207 ZNF143 ATF7 ETV6 BCLAF1 GC02M230912 GPR55 COX20P2
GH02I230947 Enhancer 1 FANTOM5 dbSUPER 0.4 -9.3 -9331 0.4 HDGF PKNOX1 EBF1 BATF IRF4 RELA POLR2A NFATC1 ATF7 ETV6 GPR55 GC02M230912 COX20P2
GH02I230950 Enhancer 1 FANTOM5 dbSUPER 0.4 -6.9 -6886 0.2 EBF1 BMI1 BATF KLF5 IRF4 RELA NFATC1 ATF7 ETV6 BCLAF1 GC02M230912 COX20P2 GPR55
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around COX20P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for COX20P2 Gene

Genomic Locations for COX20P2 Gene
chr2:230,957,504-230,958,079
(GRCh38/hg38)
Size:
576 bases
Orientation:
Plus strand
chr2:231,812,752-231,822,669
(GRCh37/hg19)

Genomic View for COX20P2 Gene

Genes around COX20P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
COX20P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for COX20P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for COX20P2 Gene

Proteins for COX20P2 Gene

Post-translational modifications for COX20P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for COX20P2 Gene

Domains & Families for COX20P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for COX20P2 Gene

Function for COX20P2 Gene

Phenotypes From GWAS Catalog for COX20P2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for COX20P2 Gene

Localization for COX20P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for COX20P2 Gene

Pathways & Interactions for COX20P2 Gene

SuperPathways for COX20P2 Gene

No Data Available

Interacting Proteins for COX20P2 Gene

Gene Ontology (GO) - Biological Process for COX20P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for COX20P2 Gene

Drugs & Compounds for COX20P2 Gene

No Compound Related Data Available

Transcripts for COX20P2 Gene

mRNA/cDNA for COX20P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for COX20P2 Gene

No ASD Table

Relevant External Links for COX20P2 Gene

GeneLoc Exon Structure for
COX20P2
ECgene alternative splicing isoforms for
COX20P2

Expression for COX20P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for COX20P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of COX20P2 Gene:

COX20P2
genes like me logo Genes that share expression patterns with COX20P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for COX20P2 Gene

Orthologs for COX20P2 Gene

Evolution for COX20P2 Gene

ENSEMBL:
Gene Tree for COX20P2 (if available)
TreeFam:
Gene Tree for COX20P2 (if available)

No data available for Orthologs for COX20P2 Gene

Paralogs for COX20P2 Gene

No data available for Paralogs for COX20P2 Gene

Variants for COX20P2 Gene

Additional Variant Information for COX20P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
COX20P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for COX20P2 Gene

Disorders for COX20P2 Gene

No disorders were found for COX20P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for COX20P2 Gene

Publications for COX20P2 Gene

No publications were found for COX20P2 Gene.

Products for COX20P2 Gene

Sources for COX20P2 Gene

Content
Loading form....