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Aliases for COX11P1 Gene

Subcategory (RNA class) for COX11P1 Gene

lncRNA

Aliases for COX11P1 Gene

  • COX11, Cytochrome C Oxidase Copper Chaperone Pseudogene 1 2 3 5
  • COX11 Pseudogene 1 2 3
  • COX11 Homolog, Cytochrome C Oxidase Assembly Protein (Yeast) Pseudogene 2
  • COX11 Homolog, Cytochrome C Oxidase Assembly Protein Pseudogene 1 3
  • COX11 Homolog, Cytochrome C Oxidase Assembly Protein, Pseudogene 3
  • COX11 Cytochrome C Oxidase Assembly Homolog Pseudogene 1 3
  • COX11P 3
  • COX11 3

External Ids for COX11P1 Gene

ORGUL Members for COX11P1 Gene

Previous HGNC Symbols for COX11P1 Gene

  • COX11P

Previous GeneCards Identifiers for COX11P1 Gene

  • GC06P028222

Summaries for COX11P1 Gene

GeneCards Summary for COX11P1 Gene

COX11P1 (COX11, Cytochrome C Oxidase Copper Chaperone Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for COX11P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for COX11P1 Gene

Genomics for COX11P1 Gene

GeneHancer (GH) Regulatory Elements for COX11P1 Gene

Promoters and enhancers for COX11P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J028446 Promoter/Enhancer 1.3 Ensembl ENCODE 650.7 +0.3 281 0.8 PKNOX1 KLF17 ZNF2 YY1 ZNF335 GLIS2 ZNF213 ZSCAN5C KLF7 KLF13 COX11P1 GC06P028447 ZNF603P ZKSCAN3 ZNF311 GC06M028458
GH06J028398 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.5 -47.6 -47577 2.5 FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC MEF2D ZSCAN12 LOC105374998 ZKSCAN3 ZKSCAN4 ZNF603P ZKSCAN8 ZSCAN9 ZSCAN23 ZSCAN31 TRIM27
GH06J028474 Enhancer 1.2 Ensembl ENCODE 12.2 +28.0 28012 1.3 PKNOX1 FOXA2 ARNT ARID4B ZNF2 SLC30A9 POLR2B ZNF213 E2F8 FOS TRT-TGT1-1 GC06M028475 ZSCAN12 ZSCAN23 ZKSCAN8 ZKSCAN4 ZKSCAN3 PGBD1 ZSCAN26 ZSCAN9
GH06J028542 Enhancer 1.3 Ensembl ENCODE 10 +96.5 96495 2.4 HDGF PKNOX1 ARNT ZFP64 ARID4B SIN3A FEZF1 ZNF2 ZNF766 ZNF213 GC06M028544 TRR-TCG5-1 ZKSCAN8 ZKSCAN4 ZKSCAN3 ZSCAN12 ZSCAN9 ZSCAN23 TRIM27 ZNF311
GH06J028553 Enhancer 1.2 Ensembl ENCODE 10.6 +107.1 107091 1.5 HDGF PKNOX1 ARNT YBX1 YY1 POLR2B ZNF766 E2F8 ZHX2 MXD4 ZKSCAN4 ZNF603P ZKSCAN3 ZSCAN9 ZSCAN12 ZKSCAN8 ZSCAN23 GPX5 ZNF311 OR2E1P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around COX11P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for COX11P1 Gene

Genomic Locations for COX11P1 Gene
chr6:28,446,920-28,447,807
(GRCh38/hg38)
Size:
888 bases
Orientation:
Plus strand
chr6:28,414,697-28,415,584
(GRCh37/hg19)

Genomic View for COX11P1 Gene

Genes around COX11P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
COX11P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for COX11P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for COX11P1 Gene

Proteins for COX11P1 Gene

Post-translational modifications for COX11P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for COX11P1 Gene

Domains & Families for COX11P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for COX11P1 Gene

Function for COX11P1 Gene

Phenotypes From GWAS Catalog for COX11P1 Gene

Animal Model Products

miRNA for COX11P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for COX11P1 Gene

Localization for COX11P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for COX11P1 Gene

Pathways & Interactions for COX11P1 Gene

SuperPathways for COX11P1 Gene

No Data Available

Interacting Proteins for COX11P1 Gene

Gene Ontology (GO) - Biological Process for COX11P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for COX11P1 Gene

Drugs & Compounds for COX11P1 Gene

No Compound Related Data Available

Transcripts for COX11P1 Gene

mRNA/cDNA for COX11P1 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for COX11P1 Gene

No ASD Table

Relevant External Links for COX11P1 Gene

GeneLoc Exon Structure for
COX11P1
ECgene alternative splicing isoforms for
COX11P1

Expression for COX11P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for COX11P1 Gene

mRNA differential expression in normal tissues according to GTEx for COX11P1 Gene

This gene is overexpressed in Testis (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of COX11P1 Gene:

COX11P1
genes like me logo Genes that share expression patterns with COX11P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for COX11P1 Gene

Orthologs for COX11P1 Gene

Evolution for COX11P1 Gene

ENSEMBL:
Gene Tree for COX11P1 (if available)
TreeFam:
Gene Tree for COX11P1 (if available)

No data available for Orthologs for COX11P1 Gene

Paralogs for COX11P1 Gene

No data available for Paralogs for COX11P1 Gene

Variants for COX11P1 Gene

Additional Variant Information for COX11P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
COX11P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for COX11P1 Gene

Disorders for COX11P1 Gene

No disorders were found for COX11P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for COX11P1 Gene

Publications for COX11P1 Gene

  1. Identification and characterization of human cDNAs specific to BCS1, PET112, SCO1, COX15, and COX11, five genes involved in the formation and function of the mitochondrial respiratory chain. (PMID: 9878253) Petruzzella V … Zeviani M (Genomics 1998) 2 3 58

Products for COX11P1 Gene

Sources for COX11P1 Gene

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