Aliases for COTL1P1 Gene

Aliases for COTL1P1 Gene

  • COTL1 Pseudogene 1 2 3 5
  • Coactosin-Like, Smith Magenis Syndrome Chromosome Region 2 3
  • Coactosin-Like F-Actin Binding Protein 1 Pseudogene 1 3
  • Coactosin-Like 1 (Dictyostelium) Pseudogene 1 2
  • Coactosin-Like 1 Pseudogene 1 3
  • COTL1P1 5

External Ids for COTL1P1 Gene

Previous HGNC Symbols for COTL1P1 Gene


Previous GeneCards Identifiers for COTL1P1 Gene

  • GC17P016759
  • GC17P016761
  • GC17P016766
  • GC17P016855

Summaries for COTL1P1 Gene

GeneCards Summary for COTL1P1 Gene

COTL1P1 (COTL1 Pseudogene 1) is a Pseudogene. Diseases associated with COTL1P1 include Smith-Magenis Syndrome.

Additional gene information for COTL1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for COTL1P1 Gene

Genomics for COTL1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for COTL1P1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J016856 Enhancer 0.4 Ensembl dbSUPER 0.7 +3.2 3192 0.8 ZIC2 piR-52444 KRT17P4 COTL1P1 TNFRSF13B ENSG00000266302
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around COTL1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for COTL1P1 Gene

Latest Assembly
2,313 bases
Plus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
2,313 bases
Plus strand

(GRCh37/hg19 by Ensembl)
375 bases
Plus strand

Genomic View for COTL1P1 Gene

Genes around COTL1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
COTL1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for COTL1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for COTL1P1 Gene

Proteins for COTL1P1 Gene

Post-translational modifications for COTL1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for COTL1P1 Gene

Domains & Families for COTL1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for COTL1P1 Gene

Function for COTL1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for COTL1P1 Gene

Localization for COTL1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for COTL1P1 Gene

Pathways & Interactions for COTL1P1 Gene

PathCards logo

SuperPathways for COTL1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for COTL1P1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for COTL1P1 Gene

Drugs & Compounds for COTL1P1 Gene

No Compound Related Data Available

Transcripts for COTL1P1 Gene

mRNA/cDNA for COTL1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for COTL1P1 Gene

No ASD Table

Relevant External Links for COTL1P1 Gene

GeneLoc Exon Structure for

Expression for COTL1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for COTL1P1 Gene

genes like me logo Genes that share expression patterns with COTL1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for COTL1P1 Gene

Orthologs for COTL1P1 Gene

Evolution for COTL1P1 Gene

Gene Tree for COTL1P1 (if available)
Gene Tree for COTL1P1 (if available)

No data available for Orthologs for COTL1P1 Gene

Paralogs for COTL1P1 Gene

No data available for Paralogs for COTL1P1 Gene

Variants for COTL1P1 Gene

Additional Variant Information for COTL1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for COTL1P1 Gene

Disorders for COTL1P1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for COTL1P1 Gene - From: GCD

Disorder Aliases PubMed IDs
smith-magenis syndrome
  • sms
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with COTL1P1: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for COTL1P1 Gene

Publications for COTL1P1 Gene

  1. Molecular mechanism for duplication 17p11.2- the homologous recombination reciprocal of the Smith-Magenis microdeletion. (PMID: 10615134) Potocki L … Lupski JR (Nature genetics 2000) 2 3

Products for COTL1P1 Gene

Sources for COTL1P1 Gene