Aliases for COPS5P2 Gene

Aliases for COPS5P2 Gene

  • COP9 Signalosome Subunit 5 Pseudogene 2 2 3
  • COP9 Constitutive Photomorphogenic Homolog Subunit 5 (Arabidopsis) (COPS5) Pseudogene 5
  • AC145423.1 5

External Ids for COPS5P2 Gene

Previous GeneCards Identifiers for COPS5P2 Gene

  • GC00U934369
  • GC12U902831

Summaries for COPS5P2 Gene

GeneCards Summary for COPS5P2 Gene

COPS5P2 (COP9 Signalosome Subunit 5 Pseudogene 2) is a Pseudogene.

Additional gene information for COPS5P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for COPS5P2 Gene

Genomics for COPS5P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for COPS5P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J123441 Enhancer 0.7 FANTOM5 600.7 +0.1 81 0.4 POLR2A TRIM22 PKNOX1 EED DPF2 RELB ASH2L TCF12 USF2 IKZF1 COPS5P2 lnc-RILPL2-1 DNAH10 HSALNG0094730 RILPL2 SNRNP35
GH12J123443 Enhancer 0.5 dbSUPER 600.7 -1.1 -1099 1 RUNX3 ZBTB40 SPI1 CEBPB ZBTB33 MLLT1 COPS5P2 lnc-RILPL2-1 RILPL2 ABCB9 DNAH10 SNRNP35
GH12J123446 Promoter/Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -4.1 -4130 1.6 PRDM10 TARDBP FOXA1 SP1 ZBTB20 ZNF157 CTBP1 FOXA2 ZNF217 ESR1 RILPL1 C12orf65 ABCB9 SBNO1-AS1 RILPL2 COPS5P2 SNRNP35
GH12J123447 Promoter/Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.1 -7097 2.3 CEBPG GATAD2A NFKBIZ RCOR2 RXRB NR2C1 IRF2 CEBPA SOX13 CEBPB RILPL2 TMED2-DT CDK2AP1 DNAH10 SNRNP35 C12orf65 COPS5P2
GH12J123444 Enhancer 0.7 ENCODE dbSUPER 0.7 -2.7 -2721 0.1 RFX1 CEBPA CEBPB TCF7 JUN JUND EP300 TCF7L2 ZNF664 KDM1A RILPL1 COPS5P2 RILPL2 SNRNP35
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around COPS5P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for COPS5P2 Gene

Genomic Locations for COPS5P2 Gene
chr12:123,441,515-123,441,858
(GRCh38/hg38)
Size:
344 bases
Orientation:
Minus strand

Genomic View for COPS5P2 Gene

Genes around COPS5P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
COPS5P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for COPS5P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for COPS5P2 Gene

Proteins for COPS5P2 Gene

Post-translational modifications for COPS5P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for COPS5P2 Gene

Domains & Families for COPS5P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for COPS5P2 Gene

Function for COPS5P2 Gene

Phenotypes From GWAS Catalog for COPS5P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for COPS5P2 Gene

Localization for COPS5P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for COPS5P2 Gene

Pathways & Interactions for COPS5P2 Gene

PathCards logo

SuperPathways for COPS5P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for COPS5P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for COPS5P2 Gene

Drugs & Compounds for COPS5P2 Gene

No Compound Related Data Available

Transcripts for COPS5P2 Gene

mRNA/cDNA for COPS5P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for COPS5P2 Gene

No ASD Table

Relevant External Links for COPS5P2 Gene

GeneLoc Exon Structure for
COPS5P2

Expression for COPS5P2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for COPS5P2 Gene

Orthologs for COPS5P2 Gene

Evolution for COPS5P2 Gene

ENSEMBL:
Gene Tree for COPS5P2 (if available)
TreeFam:
Gene Tree for COPS5P2 (if available)

No data available for Orthologs for COPS5P2 Gene

Paralogs for COPS5P2 Gene

No data available for Paralogs for COPS5P2 Gene

Variants for COPS5P2 Gene

Additional Variant Information for COPS5P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
COPS5P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for COPS5P2 Gene

Disorders for COPS5P2 Gene

No disorders were found for COPS5P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for COPS5P2 Gene

Publications for COPS5P2 Gene

No publications were found for COPS5P2 Gene.

No data available for Mastermind for COPS5P2 Gene

Products for COPS5P2 Gene

Sources for COPS5P2 Gene