Aliases for COL16A1 Gene
Aliases for COL16A1 Gene
External Ids for COL16A1 Gene
- HGNC: 2193
- Entrez Gene: 1307
- Ensembl: ENSG00000084636
- OMIM: 120326
- UniProtKB: Q07092
Previous GeneCards Identifiers for COL16A1 Gene
- GC01M031925
- GC01M031102
- GC01M031544
- GC01M031620
- GC01M031786
- GC01M031890
- GC01M032117
- GC01M030235
Summaries for COL16A1 Gene
-
This gene encodes the alpha chain of type XVI collagen, a member of the FACIT collagen family (fibril-associated collagens with interrupted helices). Members of this collagen family are found in association with fibril-forming collagens such as type I and II, and serve to maintain the integrity of the extracellular matrix. High levels of type XVI collagen have been found in fibroblasts and keratinocytes, and in smooth muscle and amnion. [provided by RefSeq, Jul 2008]
GeneCards Summary for COL16A1 Gene
COL16A1 (Collagen Type XVI Alpha 1 Chain) is a Protein Coding gene. Among its related pathways are ERK Signaling and Collagen chain trimerization. Gene Ontology (GO) annotations related to this gene include integrin binding. An important paralog of this gene is COL4A5.
UniProtKB/Swiss-Prot for COL16A1 Gene
-
Involved in mediating cell attachment and inducing integrin-mediated cellular reactions, such as cell spreading and alterations in cell morphology.
Additional gene information for COL16A1 Gene
No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for COL16A1 Gene
Genomics for COL16A1 Gene
GeneHancer (GH) Regulatory Elements for COL16A1 Gene
Promoters and enhancers for COL16A1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around COL16A1 on UCSC Golden Path with GeneCards custom track
- Top Transcription factor binding sites by QIAGEN in the COL16A1 gene promoter:
Regulatory Element Products
Genomic Locations for COL16A1 Gene
Genomic Locations for COL16A1 Gene
- chr1:31,652,247-31,704,319
- (GRCh38/hg38)
- Size:
- 52,073 bases
- Orientation:
- Minus strand
- chr1:32,117,848-32,169,920
- (GRCh37/hg19)
Genomic View for COL16A1 Gene
Genes around COL16A1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1p35.2 by Entrez Gene
- 1p35.2 by HGNC
- 1p35.2 by Ensembl
COL16A1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for COL16A1 Gene
Proteins for COL16A1 Gene
-
Protein details for COL16A1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q07092-COGA1_HUMAN
- Recommended name:
- Collagen alpha-1(XVI) chain
- Protein Accession:
- Q07092
- Q16593
- Q59F89
- Q71RG9
Protein attributes for COL16A1 Gene
- Size:
- 1604 amino acids
- Molecular mass:
- 157751 Da
- Quaternary structure:
-
- Homotrimer. Interacts with FBN1, fibronectin and integrins ITGA1/ITGB1 and ITGA2/ITGB1. Integrin ITGA1/ITGB1 binds to a unique site within COL16A1 located close to its C-terminal end between collagenous domains COL1-COL3.
Protein Expression for COL16A1 Gene
Post-translational modifications for COL16A1 Gene
- Prolines at the third position of the tripeptide repeating unit (G-X-Y) are hydroxylated in some or all of the chains.
- Glycosylated.
- Glycosylation at Asn327 and posLast=4747
- Modification sites at PhosphoSitePlus
Other Protein References for COL16A1 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
-
Custom Antibody ServicesOriGene Antibodies for COL16A1
- Invitrogen Antibodies for COL16A1
- Search GeneTex for Antibodies for COL16A1
-
Boster Bio Antibodies for COL16A1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for COL16A1
- Origene Custom Protein Services for COL16A1
- Novus Biologicals proteins for COL16A1
- antibodies-online: Search results for 3 available COL16A1 Proteins ranked by validation data
- Compare Top COL16A1 Proteins
-
Quality Products:
- Search GeneTex for Proteins for COL16A1
Assay Products
- antibodies-online: Search results for 2 available COL16A1 Elisa Kits ranked by validation data
- Compare Top COL16A1 Elisa Kits
-
Quality Products:
No data available for DME Specific Peptides for COL16A1 Gene
Domains & Families for COL16A1 Gene
Gene Families for COL16A1 Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
- Predicted secreted proteins
Protein Domains for COL16A1 Gene
- InterPro:
- Blocks:
- ProtoNet:
Suggested Antigen Peptide Sequences for COL16A1 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
Q07092UniProtKB/Swiss-Prot:
COGA1_HUMAN :- This sequence defines eighteen different domains, nine triple-helical domains (COL9 to COL1) and ten non-triple-helical domains (NC10 to NC1). The numerous interruptions in the triple helix may make this molecule either elastic or flexible.
- Belongs to the fibril-associated collagens with interrupted helices (FACIT) family.
- Domain:
-
- This sequence defines eighteen different domains, nine triple-helical domains (COL9 to COL1) and ten non-triple-helical domains (NC10 to NC1). The numerous interruptions in the triple helix may make this molecule either elastic or flexible.
- Family:
-
- Belongs to the fibril-associated collagens with interrupted helices (FACIT) family.
Function for COL16A1 Gene
Molecular function for COL16A1 Gene
- UniProtKB/Swiss-Prot Function:
- Involved in mediating cell attachment and inducing integrin-mediated cellular reactions, such as cell spreading and alterations in cell morphology.
- GENATLAS Biochemistry:
- collagen,type XVI,alpha 1,with features of fibril associated collagen with interrupted helices (?FACIT variant)
Phenotypes From GWAS Catalog for COL16A1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005178 | integrin binding | IDA | 16754661 |
| GO:0005515 | protein binding | IPI | 15165854 |
Phenotypes for COL16A1 Gene
Animal Model Products
-
Taconic Biosciences Mouse Models for COL16A1
- Cyagen custom Knockout/knockin (KOKI) mouse models for COL16A1
-
CRISPR Products
-
OriGene CRISPR knockouts for COL16A1
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for COL16A1
- genomics-online: gRNA clones - Search results for 68 available COL16A1 gene related products
- Overview of 68 available COL16A1 gene related products
- Applied Biological Materials CRISPR for COL16A1
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for COL16A1
- GenScript: Design CRISPR guide RNA sequences for COL16A1
miRNA for COL16A1 Gene
- miRTarBase miRNAs that target COL16A1
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for COL16A1
- Browse OriGene Inhibitory RNA Products For COL16A1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for COL16A1
- genomics-online: shRNA clones - Search results for 68 available COL16A1 gene related products
- Overview of 68 available COL16A1 gene related products
Clone Products
- VectorBuilder custom plasmid, inducible vectors for COL16A1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for COL16A1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for COL16A1
- Applied Biological Materials Clones for COL16A1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Cell Line Products
-
Horizon Cell Lines for COL16A1
No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for COL16A1 Gene
Localization for COL16A1 Gene
Subcellular locations from UniProtKB/Swiss-Prot for COL16A1 Gene
- Secreted, extracellular space, extracellular matrix.
| Compartment | Confidence |
|---|---|
| extracellular | 5 |
| endoplasmic reticulum | 4 |
| cytosol | 3 |
| plasma membrane | 2 |
| golgi apparatus | 2 |
| mitochondrion | 1 |
| nucleus | 1 |
- Cytosol (2)
- Golgi apparatus (2)
- Plasma membrane (2)
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005576 | extracellular region | TAS | -- |
| GO:0005581 | collagen trimer | IEA | -- |
| GO:0005597 | collagen type XVI trimer | TAS | 1284248 |
| GO:0005788 | endoplasmic reticulum lumen | TAS | -- |
| GO:0031012 | extracellular matrix | IDA | 27068509 |
Pathways & Interactions for COL16A1 Gene
| SuperPathway | Contained pathways | ||
|---|---|---|---|
| 1 | Integrin Pathway |
.67
.67
.56
|
.56
|
| 2 | Collagen chain trimerization | ||
| 3 | ERK Signaling |
.61
.58
|
.49
|
| 4 | Degradation of the extracellular matrix | ||
| 5 | Phospholipase-C Pathway |
.56
|
|
Pathways by source for COL16A1 Gene
7 Reactome pathways for COL16A1 Gene
15 Qiagen pathways for COL16A1 Gene
Interacting Proteins for COL16A1 Gene
Selected Interacting proteins:
Q07092-COGA1_HUMAN
ENSP00000362776
for COL16A1 Gene via
IID
STRING
MINT
GPS-Prot Interaction Network for COL16A1
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0007155 | cell adhesion | IDA,IEA | 16754661 |
| GO:0007229 | integrin-mediated signaling pathway | TAS | 16754661 |
| GO:0007565 | female pregnancy | TAS | 1284248 |
| GO:0030198 | extracellular matrix organization | TAS | -- |
| GO:0033622 | integrin activation | IDA | 16754661 |
No data available for SIGNOR curated interactions for COL16A1 Gene
Transcripts for COL16A1 Gene
mRNA/cDNA for COL16A1 Gene
- (106) Selected AceView cDNA sequences:
- (8) Additional mRNA sequences :
- (14) REFSEQ mRNAs :
- (17) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000373667 924 bps (uc057egk.1)
- ENST00000373668 3643 bps (uc001btl.5)
- ENST00000373672 5736 bps (uc001btk.2)
- ENST00000440437 672 bps (uc057efz.1)
- ENST00000458715 706 bps (uc057egg.1)
Unigene Clusters for COL16A1 Gene
CRISPR Products
-
OriGene CRISPR knockouts for COL16A1
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for COL16A1
- genomics-online: gRNA clones - Search results for 68 available COL16A1 gene related products
- Overview of 68 available COL16A1 gene related products
- Applied Biological Materials CRISPR for COL16A1
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for COL16A1
- GenScript: Design CRISPR guide RNA sequences for COL16A1
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for COL16A1
- Browse OriGene Inhibitory RNA Products For COL16A1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for COL16A1
- genomics-online: shRNA clones - Search results for 68 available COL16A1 gene related products
- Overview of 68 available COL16A1 gene related products
Clone Products
- VectorBuilder custom plasmid, inducible vectors for COL16A1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for COL16A1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for COL16A1
- Applied Biological Materials Clones for COL16A1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
| ExUns: | 1a | · | 1b | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5a | · | 5b | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11 | ^ | 12 | ^ | 13 | ^ | 14 | ^ | 15a | · | 15b | ^ | 16 | ^ | 17 | ^ | 18 | ^ | 19 | ^ | 20 | ^ | 21a | · | 21b | ^ | 22 | ^ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| SP9: | - | |||||||||||||||||||||||||||||||||||||||||||||||||||
| SP10: |
| ExUns: | 23 | ^ | 24 | ^ | 25 | ^ | 26 | ^ | 27 | ^ | 28 | ^ | 29a | · | 29b | ^ | 30 | ^ | 31a | · | 31b | ^ | 32 | ^ | 33 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | |||||||||||||||||||||||||
| SP2: | - | ||||||||||||||||||||||||
| SP3: | - | ||||||||||||||||||||||||
| SP4: | - | ||||||||||||||||||||||||
| SP5: | |||||||||||||||||||||||||
| SP6: | |||||||||||||||||||||||||
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| SP9: | |||||||||||||||||||||||||
| SP10: |
Expression for COL16A1 Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
- Bone (Muscoskeletal System)
- Cartilage (Muscoskeletal System)
-
Hair (Integumentary System)
- Outer Root Sheath Cells Outer Root Sheath
-
Epithelial Cells
- Outer Root Sheath Cells Outer Root Sheath
-
Blood (Hematopoietic System)
- Hematopoietic Stem Cells Hematopoietic Bone Marrow
- Kidney (Urinary System)
-
Uterus (Reproductive System)
-
Prostate (Endocrine System)
-
Gall Bladder (Hepatobiliary System)
-
Testis (Reproductive System)
-
Ovary (Reproductive System)
This gene is overexpressed in Kidney (12.5), Cerebrospinal fluid (9.0), and Bone marrow mesenchymal stem cell (6.9).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for COL16A1 Gene
NURSA nuclear receptor signaling pathways regulating expression of COL16A1 Gene:
COL16A1SOURCE GeneReport for Unigene cluster for COL16A1 Gene:
Hs.368921mRNA Expression by UniProt/SwissProt for COL16A1 Gene:
Q07092-COGA1_HUMAN
Tissue specificity:
In papillary dermis, is a component of specialized fibrillin-1-containing microfibrils, whereas in territorial cartilage matrix, it is localized to a discrete population of thin, weakly banded collagen fibrils in association with other collagens (at protein level). In the placenta, where it is found in the amnion, a membranous tissue lining the amniotic cavity. Within the amnion, it is found in an acellular, relatively dense layer of a complex network of reticular fibers. Also located to a fibroblast layer beneath this dense layer. Exists in tissues in association with other types of collagen.
Evidence on tissue expression from TISSUES for COL16A1 Gene
- Spleen(4.2)
Primer Products
-
OriGene qPCR primer pairs for COL16A1
Gene Expression Assay Products
No data available for mRNA differential expression in normal tissues , Protein tissue co-expression partners and Phenotype-based relationships between genes and organs from Gene ORGANizer for COL16A1 Gene
Orthologs for COL16A1 Gene
This gene was present in the common ancestor of animals.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | COL16A1 34 33 |
|
OneToOne | |
| dog (Canis familiaris) |
Mammalia | COL16A1 34 33 |
|
OneToOne | |
| cow (Bos Taurus) |
Mammalia | COL16A1 34 33 |
|
OneToOne | |
| rat (Rattus norvegicus) |
Mammalia | Col16a1 33 |
|
||
| mouse (Mus musculus) |
Mammalia | Col16a1 16 34 33 |
|
||
| oppossum (Monodelphis domestica) |
Mammalia | COL16A1 34 |
|
OneToOne | |
| platypus (Ornithorhynchus anatinus) |
Mammalia | COL16A1 34 |
|
OneToOne | |
| chicken (Gallus gallus) |
Aves | COL16A1 34 33 |
|
OneToOne | |
| lizard (Anolis carolinensis) |
Reptilia | COL16A1 34 |
|
OneToOne | |
| tropical clawed frog (Silurana tropicalis) |
Amphibia | LOC100497018 33 |
|
||
| zebrafish (Danio rerio) |
Actinopterygii | col16a1 34 |
|
OneToOne | |
| fruit fly (Drosophila melanogaster) |
Insecta | CG42342 34 |
|
OneToMany | |
| worm (Caenorhabditis elegans) |
Secernentea | col-99 34 |
|
OneToMany |
- Species where no ortholog for COL16A1 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- wheat (Triticum aestivum)
Evolution for COL16A1 Gene
- ENSEMBL:
- Gene Tree for COL16A1 (if available)
- TreeFam:
- Gene Tree for COL16A1 (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for COL16A1: view image
Paralogs for COL16A1 Gene
Paralogs for COL16A1 Gene
(6) SIMAP similar genes for COL16A1 Gene using alignment to 6 proteins:
- COGA1_HUMAN
- A6NCT7_HUMAN
- A6NDR9_HUMAN
- H7BY97_HUMAN
- H7BZL8_HUMAN
- H7C3F0_HUMAN
Variants for COL16A1 Gene
| SNP ID | Clin | Chr 01 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000062415 | -- | 31,672,242(-) | A/G | downstream_transcript_variant, genic_downstream_transcript_variant, intron_variant | |
| rs1000217320 | -- | 31,666,248(-) | G/A | genic_downstream_transcript_variant, intron_variant | |
| rs1000401131 | -- | 31,695,286(-) | A/C | genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant | |
| rs1000427270 | -- | 31,695,000(-) | A/G | genic_upstream_transcript_variant, intron_variant | |
| rs1000432758 | -- | 31,654,953(-) | A/G | genic_downstream_transcript_variant, intron_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv2758930 | CNV | loss | 17122850 |
| nsv1000976 | CNV | loss | 25217958 |
| nsv461028 | CNV | loss | 19166990 |
| nsv470708 | CNV | loss | 18288195 |
| nsv472148 | CNV | novel sequence insertion | 20440878 |
| nsv528364 | CNV | loss | 19592680 |
| nsv545951 | CNV | gain | 21841781 |
| nsv545952 | CNV | gain | 21841781 |
| nsv545953 | CNV | loss | 21841781 |
| nsv818123 | CNV | loss | 17921354 |
| nsv950385 | CNV | deletion | 24416366 |
Residual Variation Intolerance Score:
69.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
10.42;
90.93% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for COL16A1 Gene
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for COL16A1 Gene
Disorders for COL16A1 Gene
Additional Disease Information for COL16A1
- Genetic Association Database
- (GAD)
- Human Genome Epidemiology Navigator
- (HuGE)
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
No disorders were found for COL16A1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for COL16A1 Gene
Publications for COL16A1 Gene
- Cloning and chromosomal location of human alpha 1(XVI) collagen. (PMID: 1631157) Pan TC … Chu ML (Proceedings of the National Academy of Sciences of the United States of America 1992) 2 3 4 58
- Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study. (PMID: 20628086) Bailey SD … DREAM investigators (Diabetes care 2010) 3 44 58
- The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 3 4 58
- Collagen XVI harbors an integrin alpha1 beta1 recognition site in its C-terminal domains. (PMID: 16754661) Eble JA … Grässel S (The Journal of biological chemistry 2006) 3 4 58
- Molecular structure and interaction of recombinant human type XVI collagen. (PMID: 15165854) Kassner A … Grässel S (Journal of molecular biology 2004) 3 4 58
Products for COL16A1 Gene
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- Sino Biological Anti-His Tag Antibody
- Novus Biologicals proteins for COL16A1
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Browse Antibodies
- Browse Peptides and Proteins
- Browse Lysates
- Browse ELISA Kits
- Taconic Biosciences Mouse Models for COL16A1
- Find your next knockout model in the Taconic Knockout Repository
- Genetically Engineered Models Available Immediately
- Humanized Mice
- VectorBuilder custom plasmid, inducible vectors for COL16A1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for COL16A1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- antibodies-online: Search results for 12 available COL16A1 Antibodies ranked by validation data
- Compare Top COL16A1 Antibodies
- antibodies-online: Search results for 2 available COL16A1 Elisa Kits ranked by validation data
- Compare Top COL16A1 Elisa Kits
- Quality Products:
- antibodies-online: Search results for 3 available COL16A1 Proteins ranked by validation data
- Compare Top COL16A1 Proteins
- Quality Products:
- Search GeneTex for Antibodies for COL16A1
- Search GeneTex for Proteins for COL16A1
- Horizon Cell Lines for COL16A1
- genomics-online: cdna clones - Search results for 68 available COL16A1 gene related products
- Overview of 68 available COL16A1 gene related products
- orf clones - Search results for 68 available COL16A1 gene related products
- Overview of 68 available COL16A1 gene related products
- genomics-online: gRNA clones - Search results for 68 available COL16A1 gene related products
- Overview of 68 available COL16A1 gene related products
- genomics-online: primer clones - Search results for 68 available COL16A1 gene related products
- Overview of 68 available COL16A1 gene related products
- genomics-online: shRNA clones - Search results for 68 available COL16A1 gene related products
- Overview of 68 available COL16A1 gene related products
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for COL16A1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for COL16A1
- GeneCopoeia miRNA 3'UTR Target clone products for COL16A1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for COL16A1
- Boster Bio Antibodies for COL16A1
- Browse Boster Bio ELISA Kits
Sources for COL16A1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio