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Aliases for CNOT6LP1 Gene

Aliases for CNOT6LP1 Gene

  • CCR4-NOT Transcription Complex Subunit 6-Like Pseudogene 1 2 3 5
  • CCR4-NOT Transcription Complex, Subunit 6-Like Pseudogene 1 2

External Ids for CNOT6LP1 Gene

Previous GeneCards Identifiers for CNOT6LP1 Gene

  • GC15U900531
  • GC15M054083
  • GC15M056295

Summaries for CNOT6LP1 Gene

GeneCards Summary for CNOT6LP1 Gene

CNOT6LP1 (CCR4-NOT Transcription Complex Subunit 6-Like Pseudogene 1) is a Pseudogene.

Additional gene information for CNOT6LP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CNOT6LP1 Gene

Genomics for CNOT6LP1 Gene

GeneHancer (GH) Regulatory Elements for CNOT6LP1 Gene

Promoters and enhancers for CNOT6LP1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I056006 Promoter/Enhancer 1 Ensembl dbSUPER 558.7 0.0 -21 0.8 ZNF148 ZNF639 VEZF1 CEBPB PRDM10 CNOT6LP1 NEDD4 RN7SL568P
GH15I055990 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 7.9 +14.1 14111 4.4 ATF1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF48 GTF3C2 POLR2B ZNF766 NEDD4 PRTG PIGBOS1 PIGB CNOT6LP1 GC15P055749
GH15I056000 Enhancer 0.7 ENCODE dbSUPER 4.4 +5.5 5542 1.3 GTF3C2 FOSL1 PRDM6 L3MBTL2 SCRT2 KLF8 SP7 NEDD4 CNOT6LP1
GH15I056003 Enhancer 0.7 dbSUPER 0.8 +3.0 3004 1.8 ATF1 ZBTB21 NFRKB CEBPG FEZF1 ZNF335 ZNF316 ATF7 TRIM24 SRF PRTG CNOT6LP1 NEDD4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CNOT6LP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CNOT6LP1 Gene

Genomic Locations for CNOT6LP1 Gene
3,875 bases
Minus strand

Genomic View for CNOT6LP1 Gene

Genes around CNOT6LP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CNOT6LP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CNOT6LP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CNOT6LP1 Gene

Proteins for CNOT6LP1 Gene

Post-translational modifications for CNOT6LP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CNOT6LP1 Gene

Domains & Families for CNOT6LP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CNOT6LP1 Gene

Function for CNOT6LP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CNOT6LP1 Gene

Localization for CNOT6LP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CNOT6LP1 Gene

Pathways & Interactions for CNOT6LP1 Gene

SuperPathways for CNOT6LP1 Gene

No Data Available

Interacting Proteins for CNOT6LP1 Gene

Gene Ontology (GO) - Biological Process for CNOT6LP1 Gene


No data available for Pathways by source and SIGNOR curated interactions for CNOT6LP1 Gene

Drugs & Compounds for CNOT6LP1 Gene

No Compound Related Data Available

Transcripts for CNOT6LP1 Gene

mRNA/cDNA for CNOT6LP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CNOT6LP1 Gene

No ASD Table

Relevant External Links for CNOT6LP1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CNOT6LP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CNOT6LP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of CNOT6LP1 Gene:

genes like me logo Genes that share expression patterns with CNOT6LP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CNOT6LP1 Gene

Orthologs for CNOT6LP1 Gene

Evolution for CNOT6LP1 Gene

Gene Tree for CNOT6LP1 (if available)
Gene Tree for CNOT6LP1 (if available)

No data available for Orthologs for CNOT6LP1 Gene

Paralogs for CNOT6LP1 Gene

No data available for Paralogs for CNOT6LP1 Gene

Variants for CNOT6LP1 Gene

Additional Variant Information for CNOT6LP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CNOT6LP1 Gene

Disorders for CNOT6LP1 Gene

Additional Disease Information for CNOT6LP1

Genetic Association Database

No disorders were found for CNOT6LP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CNOT6LP1 Gene

Publications for CNOT6LP1 Gene

  1. Common variants at 2q37.3, 8q24.21, 15q21.3 and 16q24.1 influence chronic lymphocytic leukemia risk. (PMID: 20062064) Crowther-Swanepoel D … Houlston RS (Nature genetics 2010) 44 58
  2. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 44 58

Products for CNOT6LP1 Gene

Sources for CNOT6LP1 Gene

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