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Aliases for CMYA5 Gene

Aliases for CMYA5 Gene

  • Cardiomyopathy Associated 5 2 3 5
  • Genethonin-3 2 3 4
  • Tripartite Motif-Containing Protein 76 3 4
  • SPRY Domain-Containing Protein 2 3 4
  • Tripartite Motif-Containing 76 2 3
  • Dystrobrevin-Binding Protein 2 3 4
  • Myospryn 3 4
  • C5orf10 3 4
  • SPRYD2 3 4
  • TRIM76 3 4
  • Cardiomyopathy-Associated Protein 5 3
  • Chromosome 5 Open Reading Frame 10 2
  • 2310076E16Rik 3
  • DTNBP2 4

External Ids for CMYA5 Gene

Previous HGNC Symbols for CMYA5 Gene

  • C5orf10

Previous GeneCards Identifiers for CMYA5 Gene

  • GC05U990183
  • GC05P079070
  • GC05P079116
  • GC05P079108
  • GC05P079067
  • GC05P074193

Summaries for CMYA5 Gene

GeneCards Summary for CMYA5 Gene

CMYA5 (Cardiomyopathy Associated 5) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include identical protein binding. An important paralog of this gene is FSD2.

UniProtKB/Swiss-Prot for CMYA5 Gene

  • May serve as an anchoring protein that mediates the subcellular compartmentation of protein kinase A (PKA) via binding to PRKAR2A (By similarity). May function as a repressor of calcineurin-mediated transcriptional activity. May attenuate calcineurin ability to induce slow-fiber gene program in muscle and may negatively modulate skeletal muscle regeneration (By similarity).

Additional gene information for CMYA5 Gene

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CMYA5 Gene

Genomics for CMYA5 Gene

GeneHancer (GH) Regulatory Elements for CMYA5 Gene

Promoters and enhancers for CMYA5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I079688 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE dbSUPER 557.8 +0.6 571 2.9 PKNOX1 ZNF687 ZBTB6 RXRA SIN3A MNT FOXA1 E2F1 ZNF217 CTBP1 CMYA5 GC05M079729
GH05I079696 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 16.7 +7.8 7833 1.9 HDAC1 MEIS2 PKNOX1 ATF1 TEAD4 TAL1 EBF1 CEBPG ZKSCAN1 FOSL1 CMYA5 THBS4 GC05M079729
GH05I079560 Enhancer 1.2 FANTOM5 Ensembl ENCODE 14.8 -128.5 -128484 1.2 MEIS2 IRF2 PKNOX1 L3MBTL2 HLF CEBPB JUNB BACH1 CEBPG ATF2 ENSG00000277818 CMYA5 HOMER1 ENSG00000250258 THBS4 CTD-2201I18.1 PAPD4 LOC105379047
GH05I079694 Enhancer 1 FANTOM5 ENCODE dbSUPER 14.3 +5.0 5011 0.2 CBFA2T3 ZNF316 CTBP1 HMBOX1 PRDM10 MLLT1 MAFK EMSY ZBTB17 CMYA5 THBS4 GC05M079729
GH05I079754 Enhancer 0.8 ENCODE 10.8 +65.3 65261 2 FOXA2 RAD21 YY1 MIXL1 RXRA REST KAT8 NFIL3 MIER3 ZNF341 CMYA5 ENSG00000250258 GC05P079745 LOC102724557
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CMYA5 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the CMYA5 gene promoter:

Genomic Locations for CMYA5 Gene

Genomic Locations for CMYA5 Gene
chr5:79,689,836-79,800,240
(GRCh38/hg38)
Size:
110,405 bases
Orientation:
Plus strand
chr5:78,985,659-79,096,063
(GRCh37/hg19)

Genomic View for CMYA5 Gene

Genes around CMYA5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CMYA5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CMYA5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CMYA5 Gene

Proteins for CMYA5 Gene

  • Protein details for CMYA5 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N3K9-CMYA5_HUMAN
    Recommended name:
    Cardiomyopathy-associated protein 5
    Protein Accession:
    Q8N3K9
    Secondary Accessions:
    • A0PJB7
    • Q05CT4
    • Q2NKX1
    • Q2T9G9
    • Q69YQ8
    • Q69YQ9
    • Q6P517
    • Q6P5U3
    • Q7Z4I1
    • Q86T34
    • Q86T49
    • Q8N3S4
    • Q8N3S7
    • Q8NAG8
    • Q9UK88

    Protein attributes for CMYA5 Gene

    Size:
    4069 amino acids
    Molecular mass:
    449211 Da
    Quaternary structure:
    • Interacts with PRKAR2A (By similarity). Interacts with ACTN2 and DTNBP1/dysbindin (By similarity). Interacts with DES. Interacts with DMD/dystrophin (By similarity). Interacts with the calcineurin catalytic subunit PPP3CA (By similarity). Interacts with TTN. Interacts with CAPN3; this interaction, which results in CMYA5 proteolysis, may protect CAPN3 from autolysis.
    SequenceCaution:
    • Sequence=AAD55265.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305}; Sequence=AAH20856.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305}; Sequence=AAH22422.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305}; Sequence=AAH62664.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305}; Sequence=AAH63134.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305}; Sequence=AAI11530.1; Type=Erroneous termination; Positions=3283; Note=Translated as Trp.; Evidence={ECO:0000305}; Sequence=AAQ09018.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=CAH10406.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305};

neXtProt entry for CMYA5 Gene

Post-translational modifications for CMYA5 Gene

Other Protein References for CMYA5 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CMYA5 Gene

Domains & Families for CMYA5 Gene

Protein Domains for CMYA5 Gene

Suggested Antigen Peptide Sequences for CMYA5 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8N3K9

UniProtKB/Swiss-Prot:

CMYA5_HUMAN :
  • Amphipathic helix regions act as an anchoring domain for PKA, and appear to be responsible of the interaction between myospryn and PRKAR2A.
Domain:
  • Amphipathic helix regions act as an anchoring domain for PKA, and appear to be responsible of the interaction between myospryn and PRKAR2A.
genes like me logo Genes that share domains with CMYA5: view

Function for CMYA5 Gene

Molecular function for CMYA5 Gene

UniProtKB/Swiss-Prot Function:
May serve as an anchoring protein that mediates the subcellular compartmentation of protein kinase A (PKA) via binding to PRKAR2A (By similarity). May function as a repressor of calcineurin-mediated transcriptional activity. May attenuate calcineurin ability to induce slow-fiber gene program in muscle and may negatively modulate skeletal muscle regeneration (By similarity).
UniProtKB/Swiss-Prot Induction:
Down-regulated in muscle cell lines derived from patients with Duchenne muscular dystrophy (DMD).

Phenotypes From GWAS Catalog for CMYA5 Gene

Gene Ontology (GO) - Molecular Function for CMYA5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 23414517
genes like me logo Genes that share ontologies with CMYA5: view
genes like me logo Genes that share phenotypes with CMYA5: view

Animal Model Products

CRISPR Products

miRNA for CMYA5 Gene

miRTarBase miRNAs that target CMYA5

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for CMYA5

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for CMYA5 Gene

Localization for CMYA5 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CMYA5 Gene

Cytoplasm. Cytoplasm, perinuclear region. Cytoplasm, myofibril, sarcomere, M line. Note=Found predominantly at the periphery of the nucleus but also throughout the cell. Localized in lysosomes (By similarity). In skeletal muscles, localizes along myofiber periphery, at costameres (By similarity). Predominantly flanks Z-disks. Occasionally present at the M-band level. {ECO:0000250}.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for CMYA5 gene
Compartment Confidence
nucleus 3
cytosol 2

Gene Ontology (GO) - Cellular Components for CMYA5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
GO:0031430 M band IEA --
GO:0048471 perinuclear region of cytoplasm IEA --
genes like me logo Genes that share ontologies with CMYA5: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for CMYA5 Gene

Pathways & Interactions for CMYA5 Gene

SuperPathways for CMYA5 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CMYA5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CMYA5 Gene

Drugs & Compounds for CMYA5 Gene

No Compound Related Data Available

Transcripts for CMYA5 Gene

Unigene Clusters for CMYA5 Gene

Cardiomyopathy associated 5:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for CMYA5

Alternative Splicing Database (ASD) splice patterns (SP) for CMYA5 Gene

No ASD Table

Relevant External Links for CMYA5 Gene

GeneLoc Exon Structure for
CMYA5
ECgene alternative splicing isoforms for
CMYA5

Expression for CMYA5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CMYA5 Gene

mRNA differential expression in normal tissues according to GTEx for CMYA5 Gene

This gene is overexpressed in Muscle - Skeletal (x35.3), Heart - Left Ventricle (x8.9), and Heart - Atrial Appendage (x5.0).

Protein differential expression in normal tissues from HIPED for CMYA5 Gene

This gene is overexpressed in Cerebrospinal fluid (65.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for CMYA5 Gene



Protein tissue co-expression partners for CMYA5 Gene

NURSA nuclear receptor signaling pathways regulating expression of CMYA5 Gene:

CMYA5

SOURCE GeneReport for Unigene cluster for CMYA5 Gene:

Hs.482625

mRNA Expression by UniProt/SwissProt for CMYA5 Gene:

Q8N3K9-CMYA5_HUMAN
Tissue specificity: Expressed in skeletal muscle; at a strong level and in heart.

Evidence on tissue expression from TISSUES for CMYA5 Gene

  • Muscle(4.8)
  • Liver(4.2)
  • Heart(3.3)
genes like me logo Genes that share expression patterns with CMYA5: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and Phenotype-based relationships between genes and organs from Gene ORGANizer for CMYA5 Gene

Orthologs for CMYA5 Gene

This gene was present in the common ancestor of chordates.

Orthologs for CMYA5 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CMYA5 33 34
  • 99.34 (n)
dog
(Canis familiaris)
Mammalia CMYA5 33 34
  • 82.9 (n)
cow
(Bos Taurus)
Mammalia LOC533581 33
  • 79.79 (n)
CMYA5 34
  • 71 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Cmya5 34
  • 60 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia CMYA5 34
  • 48 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia oan-mir-7415 34
  • 30 (a)
OneToOne
chicken
(Gallus gallus)
Aves CMYA5 34
  • 32 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia CMYA5 34
  • 39 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia cmya5 33
  • 58.92 (n)
African clawed frog
(Xenopus laevis)
Amphibia Xl.24353 33
zebrafish
(Danio rerio)
Actinopterygii cmya5 34
  • 28 (a)
OneToMany
CMYA5 (2 of 2) 34
  • 23 (a)
OneToMany
Species where no ortholog for CMYA5 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for CMYA5 Gene

ENSEMBL:
Gene Tree for CMYA5 (if available)
TreeFam:
Gene Tree for CMYA5 (if available)

Paralogs for CMYA5 Gene

Paralogs for CMYA5 Gene

genes like me logo Genes that share paralogs with CMYA5: view

Variants for CMYA5 Gene

Sequence variations from dbSNP and Humsavar for CMYA5 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs61744879 uncertain-significance, not provided 79,758,776(+) C/T coding_sequence_variant, missense_variant, non_coding_transcript_variant
rs1000011623 -- 79,720,369(+) G/T intron_variant
rs1000071855 -- 79,722,036(+) A/G/T intron_variant
rs1000080998 -- 79,771,369(+) G/C genic_downstream_transcript_variant, intron_variant
rs1000111830 -- 79,726,960(+) G/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for CMYA5 Gene

Variant ID Type Subtype PubMed ID
nsv956448 CNV deletion 24416366
nsv830357 CNV gain 17160897
nsv518412 CNV loss 19592680
nsv327489 CNV deletion 16902084
nsv1137012 CNV deletion 24896259
nsv1071719 CNV deletion 25765185
nsv1021113 CNV gain 25217958
esv996722 CNV deletion 20482838
esv7986 OTHER inversion 19470904
esv5704 CNV loss 19470904
esv3605548 CNV loss 21293372
esv3605547 CNV loss 21293372
esv3605545 CNV gain 21293372
esv3605544 CNV loss 21293372
esv3605535 CNV gain 21293372
esv3605534 CNV loss 21293372
esv3566155 CNV deletion 23714750
esv3406 CNV loss 18987735
esv3346060 CNV duplication 20981092
esv3339809 OTHER inversion 20981092
esv2730358 CNV deletion 23290073
esv2730357 CNV deletion 23290073
esv2730356 CNV deletion 23290073
esv2669424 CNV deletion 23128226
esv2614623 CNV deletion 19546169
esv1002149 CNV deletion 20482838

Variation tolerance for CMYA5 Gene

Residual Variation Intolerance Score: 99.9% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 31.15; 99.92% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for CMYA5 Gene

Human Gene Mutation Database (HGMD)
CMYA5
SNPedia medical, phenotypic, and genealogical associations of SNPs for
CMYA5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CMYA5 Gene

Disorders for CMYA5 Gene

Additional Disease Information for CMYA5

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for CMYA5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CMYA5 Gene

Publications for CMYA5 Gene

  1. Myospryn is a novel binding partner for dysbindin in muscle. (PMID: 14688250) Benson MA … Blake DJ (The Journal of biological chemistry 2004) 2 3 4 58
  2. Interactions with M-band titin and calpain 3 link myospryn (CMYA5) to tibial and limb-girdle muscular dystrophies. (PMID: 20634290) Sarparanta J … Udd B (The Journal of biological chemistry 2010) 3 4 58
  3. Gene polymorphism of myospryn (cardiomyopathy-associated 5) is associated with left ventricular wall thickness in patients with hypertension. (PMID: 18344630) Nakagami H … Ogihara T (Hypertension research : official journal of the Japanese Society of Hypertension 2007) 3 44 58
  4. Proper perinuclear localization of the TRIM-like protein myospryn requires its binding partner desmin. (PMID: 17872945) Kouloumenta A … Capetanaki Y (The Journal of biological chemistry 2007) 3 4 58
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 58

Products for CMYA5 Gene

  • Addgene plasmids for CMYA5

Sources for CMYA5 Gene

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