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Aliases for CLYBL-AS1 Gene

Subcategory (RNA class) for CLYBL-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for CLYBL-AS1 Gene

  • CLYBL Antisense RNA 1 2 3 5
  • CLYBL Antisense RNA 1 (Non-Protein Coding) 2 3

External Ids for CLYBL-AS1 Gene

Previous GeneCards Identifiers for CLYBL-AS1 Gene

  • GC00U933758
  • GC13M100379

Summaries for CLYBL-AS1 Gene

GeneCards Summary for CLYBL-AS1 Gene

CLYBL-AS1 (CLYBL Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CLYBL-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CLYBL-AS1 Gene

Genomics for CLYBL-AS1 Gene

GeneHancer (GH) Regulatory Elements for CLYBL-AS1 Gene

Promoters and enhancers for CLYBL-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J099728 Enhancer 0.2 FANTOM5 656.1 0.0 -14 0.1 CLYBL-AS1 GC13M099733 CLYBL
GH13J099729 Enhancer 0.2 dbSUPER 650.7 -1.1 -1120 1.6 CLYBL-AS1 GC13M099733 CLYBL
GH13J099701 Enhancer 0.7 ENCODE dbSUPER 12.1 +26.0 26009 2 CTCF ZNF202 NANOG RNF2 POU5F1 SIN3A CLYBL-AS1 CLYBL CLYBL-AS2
GH13J099706 Enhancer 0.6 ENCODE dbSUPER 11.9 +24.9 24869 0.2 NANOG POU5F1 SIN3A CLYBL-AS1 CLYBL-AS2 CLYBL
GH13J099681 Enhancer 0.6 ENCODE dbSUPER 11.2 +47.1 47138 0.5 SCRT1 USF1 CLYBL-AS1 GC13P099679 CLYBL-AS2 CLYBL
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CLYBL-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CLYBL-AS1 Gene

Genomic Locations for CLYBL-AS1 Gene
chr13:99,725,668-99,729,001
(GRCh38/hg38)
Size:
3,334 bases
Orientation:
Minus strand
chr13:100,378,501-100,379,745
(GRCh37/hg19)
Size:
1,245 bases
Orientation:
Minus strand

Genomic View for CLYBL-AS1 Gene

Genes around CLYBL-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CLYBL-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CLYBL-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CLYBL-AS1 Gene

Proteins for CLYBL-AS1 Gene

Post-translational modifications for CLYBL-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CLYBL-AS1 Gene

Domains & Families for CLYBL-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CLYBL-AS1 Gene

Function for CLYBL-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CLYBL-AS1 Gene

Localization for CLYBL-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CLYBL-AS1 Gene

Pathways & Interactions for CLYBL-AS1 Gene

SuperPathways for CLYBL-AS1 Gene

No Data Available

Interacting Proteins for CLYBL-AS1 Gene

Gene Ontology (GO) - Biological Process for CLYBL-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CLYBL-AS1 Gene

Drugs & Compounds for CLYBL-AS1 Gene

No Compound Related Data Available

Transcripts for CLYBL-AS1 Gene

mRNA/cDNA for CLYBL-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(4) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for CLYBL-AS1 Gene

No ASD Table

Relevant External Links for CLYBL-AS1 Gene

GeneLoc Exon Structure for
CLYBL-AS1
ECgene alternative splicing isoforms for
CLYBL-AS1

Expression for CLYBL-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CLYBL-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CLYBL-AS1 Gene

This gene is overexpressed in Testis (x38.4).
genes like me logo Genes that share expression patterns with CLYBL-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CLYBL-AS1 Gene

Orthologs for CLYBL-AS1 Gene

Evolution for CLYBL-AS1 Gene

ENSEMBL:
Gene Tree for CLYBL-AS1 (if available)
TreeFam:
Gene Tree for CLYBL-AS1 (if available)

No data available for Orthologs for CLYBL-AS1 Gene

Paralogs for CLYBL-AS1 Gene

No data available for Paralogs for CLYBL-AS1 Gene

Variants for CLYBL-AS1 Gene

Sequence variations from dbSNP and Humsavar for CLYBL-AS1 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1001208323 -- 99,727,051(-) C/T intron_variant
rs1001252927 -- 99,726,850(-) C/T intron_variant
rs1002307595 -- 99,729,698(-) T/C upstream_transcript_variant
rs1002897557 -- 99,725,851(-) C/G/T downstream_transcript_variant, genic_downstream_transcript_variant, non_coding_transcript_variant
rs1002983730 -- 99,726,808(-) GT/ intron_variant

Structural Variations from Database of Genomic Variants (DGV) for CLYBL-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2747875 CNV deletion 23290073
nsv832696 CNV gain 17160897

Additional Variant Information for CLYBL-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CLYBL-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CLYBL-AS1 Gene

Disorders for CLYBL-AS1 Gene

Additional Disease Information for CLYBL-AS1

No disorders were found for CLYBL-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CLYBL-AS1 Gene

Publications for CLYBL-AS1 Gene

No publications were found for CLYBL-AS1 Gene.

Products for CLYBL-AS1 Gene

Sources for CLYBL-AS1 Gene

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