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Aliases for CLK2P1 Gene

Aliases for CLK2P1 Gene

  • CDC Like Kinase 2, Pseudogene 1 2 3 5
  • CDC-Like Kinase 2, Pseudogene 2 3
  • CDC-Like Kinase 2, Pseudogene 1 2
  • CLK2P 3

External Ids for CLK2P1 Gene

Previous HGNC Symbols for CLK2P1 Gene

  • CLK2P

Summaries for CLK2P1 Gene

GeneCards Summary for CLK2P1 Gene

CLK2P1 (CDC Like Kinase 2, Pseudogene 1) is a Pseudogene.

Additional gene information for CLK2P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CLK2P1 Gene

Genomics for CLK2P1 Gene

GeneHancer (GH) Regulatory Elements for CLK2P1 Gene

Promoters and enhancers for CLK2P1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I023297 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 22.2 +287.2 287239 3.4 HDGF PKNOX1 SMAD1 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 MALSU1 KLHL7-AS1 CLK2P1 TRA2A CCDC126 ENSG00000232627
GH07I023011 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 21.7 +573.3 573262 3.4 HDGF PKNOX1 SMAD1 FOXA2 ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B FAM126A CLK2P1 CCDC126 TOMM7 LOC541472 ENSG00000226329 PIR51294
GH07I023722 Enhancer 0.7 ENCODE 11.7 -136.5 -136454 0.4 LEF1 ATF1 NFRKB ZBTB40 CTBP1 POLR2A FOXK2 BRD9 L3MBTL2 NR4A1 PCMTD1P3 STK31 CLK2P1 TRA2A CCDC126 TPT1P7
GH07I022782 Enhancer 0.7 ENCODE 11.7 +803.7 803720 0.2 CTCF RB1 ZNF644 RAD21 CC2D1A ARID2 HNF4G SMC3 ZNF143 ZNF654 TOMM7 CLK2P1 TRA2A SNHG26 CCDC126 RPS26P32 GC07M022788
GH07I022780 Enhancer 0.7 ENCODE 11.7 +804.7 804729 1.8 CTCF JUN ZNF644 RAD21 CC2D1A EGR1 ARID2 HNF4G ZNF143 FOS TOMM7 CLK2P1 TRA2A SNHG26 CCDC126 RPS26P32 GC07M022788
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CLK2P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CLK2P1 Gene

Genomic Locations for CLK2P1 Gene
1,812 bases
Minus strand

Genomic View for CLK2P1 Gene

Genes around CLK2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CLK2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CLK2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CLK2P1 Gene

Proteins for CLK2P1 Gene

Post-translational modifications for CLK2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CLK2P1 Gene

Domains & Families for CLK2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CLK2P1 Gene

Function for CLK2P1 Gene

Phenotypes From GWAS Catalog for CLK2P1 Gene

genes like me logo Genes that share phenotypes with CLK2P1: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CLK2P1 Gene

Localization for CLK2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CLK2P1 Gene

Pathways & Interactions for CLK2P1 Gene

SuperPathways for CLK2P1 Gene

No Data Available

Interacting Proteins for CLK2P1 Gene

Gene Ontology (GO) - Biological Process for CLK2P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for CLK2P1 Gene

Drugs & Compounds for CLK2P1 Gene

No Compound Related Data Available

Transcripts for CLK2P1 Gene

mRNA/cDNA for CLK2P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CLK2P1 Gene

No ASD Table

Relevant External Links for CLK2P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CLK2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CLK2P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of CLK2P1 Gene:

genes like me logo Genes that share expression patterns with CLK2P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CLK2P1 Gene

Orthologs for CLK2P1 Gene

Evolution for CLK2P1 Gene

Gene Tree for CLK2P1 (if available)
Gene Tree for CLK2P1 (if available)

No data available for Orthologs for CLK2P1 Gene

Paralogs for CLK2P1 Gene

No data available for Paralogs for CLK2P1 Gene

Variants for CLK2P1 Gene

Sequence variations from dbSNP and Humsavar for CLK2P1 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000772697 -- 23,586,906(-) A/G upstream_transcript_variant
rs1004856879 -- 23,588,322(-) A/T upstream_transcript_variant
rs1004887892 -- 23,587,991(-) G/A upstream_transcript_variant
rs1005716947 -- 23,588,483(-) A/G upstream_transcript_variant
rs1005748111 -- 23,586,447(-) G/A non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for CLK2P1 Gene

Variant ID Type Subtype PubMed ID
nsv981440 CNV duplication 23825009
nsv7393 OTHER inversion 18451855

Additional Variant Information for CLK2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CLK2P1 Gene

Disorders for CLK2P1 Gene

Additional Disease Information for CLK2P1

No disorders were found for CLK2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CLK2P1 Gene

Publications for CLK2P1 Gene

  1. Chromosomal mapping of three human LAMMER protein-kinase-encoding genes. (PMID: 9856501) Talmadge CB … Rabinow L (Human genetics 1998) 2 3 58
  2. Characterization by cDNA cloning of two new human protein kinases. Evidence by sequence comparison of a new family of mammalian protein kinases. (PMID: 7990150) Hanes J … Scheit KH (Journal of molecular biology 1994) 2 3 58
  3. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer SW … Tsui LC (Science (New York, N.Y.) 2003) 3 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for CLK2P1 Gene

Sources for CLK2P1 Gene

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