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CLIP1-AS1 (CLIP1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with CLIP1-AS1 include Astrocytoma.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH12J122394 | Promoter/Enhancer | 1.4 | EPDnew Ensembl ENCODE dbSUPER | 600.7 | -0.8 | -842 | 3 | CREB1 GATAD2A ZNF629 ZNF692 SP1 CEBPA ATF7 CEBPB CTBP1 ATF3 | CLIP1-AS1 CLIP1 RSRC2 ZCCHC8 TRD-GTC8-1-001 VPS33A | |
GH12J122399 | Enhancer | 0.3 | Ensembl dbSUPER | 600.7 | +1.9 | 1859 | 0.4 | CLIP1-AS1 CLIP1 VPS33A | ||
GH12J122646 | Enhancer | 1.1 | FANTOM5 ENCODE | 4.1 | +251.5 | 251509 | 1.6 | SP1 JUND RELA TCF12 IKZF2 RCOR1 TRIM22 HDAC1 PKNOX1 EP300 | HCAR2 HCAR3 ZCCHC8 CLIP1-AS1 VPS37B CLIP1 RSRC2 piR-50444-094 ENSG00000274191 KNTC1 | |
GH12J122659 | Enhancer | 0.7 | Ensembl ENCODE | 4.2 | +264.3 | 264282 | 1.2 | CREB1 CTCF USF1 PKNOX1 RAD21 TOE1 RAD51 USF2 SMC3 ZBTB6 | lnc-KNTC1-4 piR-61945-114 HCAR3 HCAR1 C12orf65 CLIP1-AS1 lnc-KNTC1-3 HCAR2 KNTC1 | |
GH12J122651 | Enhancer | 0.3 | ENCODE | 4.2 | +255.3 | 255307 | 0.2 | ZBTB33 | CLIP1-AS1 piR-50444-094 ENSG00000274191 HCAR2 KNTC1 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS000041379A_9606 | lncRNA | 1745 | 4 |
Ensembl: ENST00000535976 (view in UCSC) , LncBook: HSALNT0196221, LNCipedia: CLIP1-AS1:4, NONCODE: NONHSAT031507.2, |
URS00005BB415_9606 | lncRNA | 447 | 3 |
Ensembl: ENST00000539034 (view in UCSC) , LncBook: HSALNT0196216, LNCipedia: CLIP1-AS1:1, |
URS000075B10A_9606 | lncRNA | 896 | 2 |
HGNC: 48586, RefSeq: NR_045382, |
URS00008BA100_9606 | lncRNA | 896 | 2 |
LncBook: HSALNT0196217, LNCipedia: CLIP1-AS1:2, |
URS00008B8C30_9606 | lncRNA | 694 | 2 |
LNCipedia: CLIP1-AS1:3, NONCODE: NONHSAT031506.2, |
Disorder | Aliases | PubMed IDs |
---|---|---|
astrocytoma |
|
No publications were found for CLIP1-AS1 Gene.