Aliases for CLIC1P1 Gene

Aliases for CLIC1P1 Gene

  • Chloride Intracellular Channel 1 Pseudogene 1 2 3 5
  • CLIC1P1 5

External Ids for CLIC1P1 Gene

Previous GeneCards Identifiers for CLIC1P1 Gene

  • GC12U900652
  • GC12P121356

Summaries for CLIC1P1 Gene

GeneCards Summary for CLIC1P1 Gene

CLIC1P1 (Chloride Intracellular Channel 1 Pseudogene 1) is a Pseudogene.

Additional gene information for CLIC1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CLIC1P1 Gene

Genomics for CLIC1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CLIC1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J120914 Enhancer 0.5 ENCODE dbSUPER 600.7 +0.4 423 0.9 SCRT2 SCRT1 CLIC1P1 RPL12P33 ACADS SPPL3 HNF1A HNF1A-AS1
GH12J121222 Enhancer 1.3 Ensembl ENCODE dbSUPER 5.8 +312.3 312263 8.5 CREB1 CTCF ATF7 YBX1 PRDM10 ZNF629 ZHX2 FOXA1 ZNF143 PATZ1 P2RX4 RPL29P24 ANAPC5 CAMKK2 CLIC1P1 MN309611 NONHSAG012541.2 lnc-CAMKK2-1
GH12J121235 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas dbSUPER 5.8 +324.6 324580 6.2 PRDM10 FOXA1 ZIC2 SCRT2 EGR1 FOXA2 CTCF ZBTB48 YY1 SCRT1 P2RX4 OASL ACADS ENSG00000256569 CAMKK2 CLIC1P1 NONHSAG012541.2 lnc-CAMKK2-1
GH12J120905 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -7.2 -7247 2.9 TCF12 CEBPB TEAD1 SAP130 SMAD4 NFIL3 RARA FOS HLF ZNF580 ACADS ENSG00000256569 HNF1A-AS1 C12orf43 SPPL3 ENSG00000272849 ENSG00000286493 XLOC_009911 CLIC1P1 HNF1A
GH12J120909 Enhancer 0.4 Ensembl dbSUPER 0.7 -5.0 -4991 0.4 MNT ACADS ENSG00000256569 CLIC1P1 ENSG00000286493 XLOC_009911 SPPL3 HNF1A HNF1A-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CLIC1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CLIC1P1 Gene

Genomic Locations for CLIC1P1 Gene
chr12:120,914,392-120,915,323
(GRCh38/hg38)
Size:
932 bases
Orientation:
Plus strand
chr12:121,352,203-121,352,926
(GRCh37/hg19)
Size:
724 bases
Orientation:
Plus strand

Genomic View for CLIC1P1 Gene

Genes around CLIC1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CLIC1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CLIC1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CLIC1P1 Gene

Proteins for CLIC1P1 Gene

Post-translational modifications for CLIC1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CLIC1P1 Gene

Domains & Families for CLIC1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CLIC1P1 Gene

Function for CLIC1P1 Gene

Phenotypes From GWAS Catalog for CLIC1P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CLIC1P1 Gene

Localization for CLIC1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CLIC1P1 Gene

Pathways & Interactions for CLIC1P1 Gene

PathCards logo

SuperPathways for CLIC1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CLIC1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CLIC1P1 Gene

Drugs & Compounds for CLIC1P1 Gene

No Compound Related Data Available

Transcripts for CLIC1P1 Gene

mRNA/cDNA for CLIC1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for CLIC1P1 Gene

No ASD Table

Relevant External Links for CLIC1P1 Gene

GeneLoc Exon Structure for
CLIC1P1

Expression for CLIC1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CLIC1P1 Gene

mRNA differential expression in normal tissues according to GTEx for CLIC1P1 Gene

This gene is overexpressed in Testis (x29.9) and Whole Blood (x5.0).
genes like me logo Genes that share expression patterns with CLIC1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CLIC1P1 Gene

Orthologs for CLIC1P1 Gene

Evolution for CLIC1P1 Gene

ENSEMBL:
Gene Tree for CLIC1P1 (if available)
TreeFam:
Gene Tree for CLIC1P1 (if available)

No data available for Orthologs for CLIC1P1 Gene

Paralogs for CLIC1P1 Gene

No data available for Paralogs for CLIC1P1 Gene

Variants for CLIC1P1 Gene

Additional Variant Information for CLIC1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CLIC1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CLIC1P1 Gene

Disorders for CLIC1P1 Gene

No disorders were found for CLIC1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CLIC1P1 Gene

Publications for CLIC1P1 Gene

No publications were found for CLIC1P1 Gene.

No data available for Mastermind for CLIC1P1 Gene

Products for CLIC1P1 Gene

Sources for CLIC1P1 Gene