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Aliases for CLEC12A-AS1 Gene

Subcategory (RNA class) for CLEC12A-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for CLEC12A-AS1 Gene

  • CLEC12A Antisense RNA 1 2 3 5

External Ids for CLEC12A-AS1 Gene

Previous GeneCards Identifiers for CLEC12A-AS1 Gene

  • GC12M011577
  • GC12M011769
  • GC12M011954

Summaries for CLEC12A-AS1 Gene

GeneCards Summary for CLEC12A-AS1 Gene

CLEC12A-AS1 (CLEC12A Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CLEC12A-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CLEC12A-AS1 Gene

Genomics for CLEC12A-AS1 Gene

GeneHancer (GH) Regulatory Elements for CLEC12A-AS1 Gene

Promoters and enhancers for CLEC12A-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J009950 Promoter/Enhancer 1.2 EPDnew Ensembl ENCODE dbSUPER 650.7 +1.9 1946 0.9 RUNX3 CLEC12A CLEC12A-AS1 GC12P009952
GH12J010016 Enhancer 1 Ensembl ENCODE dbSUPER 11.7 -64.4 -64395 2.5 MEIS2 JUN BACH1 MAFG ATF2 RFX5 JUND ZNF316 POLR2A CREB1 CLEC12A CLEC12A-AS1 CLEC7A KLRF1 LINC02470 CLEC1B CLEC12B GC12P010023 LOC102724020
GH12J009999 Promoter 0.7 EPDnew 11.3 -45.8 -45805 0.1 MAFG NFE2 CLEC1B LINC02470 CLEC12A CLEC12A-AS1 CLEC12B
GH12J009829 Enhancer 0.7 FANTOM5 10.7 +123.3 123283 0.3 ZNF639 RNF2 ZNF621 GFI1B FEZF1 OSR2 ZNF148 PRDM6 BCL11A BCL6B KLRF1 KLRD1 MAGOHB TAS2R10 CLEC12A CLEC12A-AS1 KLRB1 CD69 ENSG00000255882
GH12J010027 Enhancer 0.6 Ensembl ENCODE 10.6 -74.5 -74465 1.2 POLR2A IKZF1 MAX CLEC7A CLEC12A-AS1 CLEC12A TMEM52B LINC02470 LOC728715 GC12P010023 LOC102724020
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CLEC12A-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CLEC12A-AS1 Gene

Genomic Locations for CLEC12A-AS1 Gene
chr12:9,948,137-9,953,336
(GRCh38/hg38)
Size:
5,200 bases
Orientation:
Minus strand
chr12:10,100,736-10,105,935
(GRCh37/hg19)
Size:
5,200 bases
Orientation:
Minus strand

Genomic View for CLEC12A-AS1 Gene

Genes around CLEC12A-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CLEC12A-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CLEC12A-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CLEC12A-AS1 Gene

Proteins for CLEC12A-AS1 Gene

Post-translational modifications for CLEC12A-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CLEC12A-AS1 Gene

Domains & Families for CLEC12A-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CLEC12A-AS1 Gene

Function for CLEC12A-AS1 Gene

Phenotypes From GWAS Catalog for CLEC12A-AS1 Gene

Phenotypes for CLEC12A-AS1 Gene

genes like me logo Genes that share phenotypes with CLEC12A-AS1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CLEC12A-AS1 Gene

Localization for CLEC12A-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CLEC12A-AS1 Gene

Pathways & Interactions for CLEC12A-AS1 Gene

SuperPathways for CLEC12A-AS1 Gene

No Data Available

Interacting Proteins for CLEC12A-AS1 Gene

Gene Ontology (GO) - Biological Process for CLEC12A-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CLEC12A-AS1 Gene

Drugs & Compounds for CLEC12A-AS1 Gene

No Compound Related Data Available

Transcripts for CLEC12A-AS1 Gene

mRNA/cDNA for CLEC12A-AS1 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for CLEC12A-AS1

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CLEC12A-AS1 Gene

No ASD Table

Relevant External Links for CLEC12A-AS1 Gene

GeneLoc Exon Structure for
CLEC12A-AS1
ECgene alternative splicing isoforms for
CLEC12A-AS1

Expression for CLEC12A-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CLEC12A-AS1 Gene

Orthologs for CLEC12A-AS1 Gene

Evolution for CLEC12A-AS1 Gene

ENSEMBL:
Gene Tree for CLEC12A-AS1 (if available)
TreeFam:
Gene Tree for CLEC12A-AS1 (if available)

No data available for Orthologs for CLEC12A-AS1 Gene

Paralogs for CLEC12A-AS1 Gene

No data available for Paralogs for CLEC12A-AS1 Gene

Variants for CLEC12A-AS1 Gene

Sequence variations from dbSNP and Humsavar for CLEC12A-AS1 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000069162 -- 9,950,981(-) C/A non_coding_transcript_variant
rs1000121735 -- 9,948,304(-) A/G non_coding_transcript_variant
rs1000849729 -- 9,949,880(-) A/T non_coding_transcript_variant
rs1001031307 -- 9,949,466(-) G/A non_coding_transcript_variant
rs1001128503 -- 9,949,575(-) T/C non_coding_transcript_variant

Additional Variant Information for CLEC12A-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CLEC12A-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CLEC12A-AS1 Gene

Disorders for CLEC12A-AS1 Gene

Additional Disease Information for CLEC12A-AS1

No disorders were found for CLEC12A-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CLEC12A-AS1 Gene

Publications for CLEC12A-AS1 Gene

No publications were found for CLEC12A-AS1 Gene.

Products for CLEC12A-AS1 Gene

Sources for CLEC12A-AS1 Gene

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