Aliases for CLCP1 Gene
External Ids for CLCP1 Gene
- HGNC: 19257
- Entrez Gene: 266626
- Ensembl: ENSG00000232305
Previous GeneCards Identifiers for CLCP1 Gene
- GC22U990249
- GC22M016277
- GC22M017904
Summaries for CLCP1 Gene
GeneCards Summary for CLCP1 Gene
CLCP1 (Charcot-Leyden Crystal Protein Pseudogene 1) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CLCP1 Gene
Genomics for CLCP1 Gene
GeneHancer (GH) Regulatory Elements for CLCP1 Gene
Promoters and enhancers for CLCP1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH22I017436 | Enhancer | 0.9 | Ensembl ENCODE | 0.4 | -12.2 | -12180 | 1.7 | ETV1 MZF1 ZNF398 ZBTB8A ZIC2 ZNF664 PATZ1 ZNF629 PRDM10 PRDM1 | CECR2 CLCP1 GC22M017518 | |
| GH22I017430 | Enhancer | 0.6 | ENCODE | 0.4 | -5.9 | -5860 | 0.9 | CEBPB CEBPG ZNF398 ATF2 ATF4 ZFHX2 GLIS1 ZBTB17 EGR2 | CECR2 CLCP1 GC22M017518 | |
| GH22I017443 | Enhancer | 0.6 | ENCODE | 0.4 | -19.0 | -18996 | 1.5 | ETV1 ELF1 ZBTB40 E4F1 GABPA PRDM6 POLR2A GABPB1 NR2C1 NR2C2 | CECR2 CLCP1 GC22M017518 | |
| GH22I017475 | Enhancer | 1 | Ensembl ENCODE | 0.2 | -52.1 | -52145 | 2 | HDAC1 PKNOX1 ATF1 ZBTB40 ZNF335 ZNF366 KLF7 ATF7 CREM SP3 | CECR2 CECR3 ADA2 GC22M017518 CLCP1 | |
| GH22I017501 | Enhancer | 0.6 | ENCODE | 0.2 | -77.0 | -76993 | 0.2 | CTCF ZNF654 TRIM22 REST RAD21 ARID2 SMC3 ZNF143 ZBTB17 ZBTB20 | CECR2 GC22M017518 CLCP1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around CLCP1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for CLCP1 Gene
Genomic Locations for CLCP1 Gene
- chr22:17,424,244-17,424,851
- (GRCh38/hg38)
- Size:
- 608 bases
- Orientation:
- Minus strand
- chr22:17,903,292-17,903,899
- (GRCh37/hg19)
Genomic View for CLCP1 Gene
Genes around CLCP1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 22q11.21 by Ensembl
- 22q11.21 by Entrez Gene
- 22q11.21 by HGNC
CLCP1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for CLCP1 Gene
Proteins for CLCP1 Gene
Post-translational modifications for CLCP1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for CLCP1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CLCP1
- Origene Custom Protein Services for CLCP1
- Search GeneTex for Proteins for CLCP1
No data available for DME Specific Peptides for CLCP1 Gene
Domains & Families for CLCP1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CLCP1 Gene
Function for CLCP1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for CLCP1
-
- Search ViGene Biosciences for CLCP1
CRISPR Products
- Browse CRISPR knockouts for CLCP1
- Applied Biological Materials CRISPR for CLCP1
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for CLCP1
Inhibitory RNA Products
- Search ViGene Biosciences for CLCP1
Clone Products
- GenScript: Custom all cDNA clones Services for CLCP1
- VectorBuilder custom plasmid, inducible vectors for CLCP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CLCP1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for CLCP1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CLCP1 Gene
Localization for CLCP1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CLCP1 Gene
Transcripts for CLCP1 Gene
mRNA/cDNA for CLCP1 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for CLCP1
- Applied Biological Materials CRISPR for CLCP1
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for CLCP1
Inhibitory RNA Products
- Search ViGene Biosciences for CLCP1
Clone Products
- GenScript: Custom all cDNA clones Services for CLCP1
- VectorBuilder custom plasmid, inducible vectors for CLCP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CLCP1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for CLCP1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for CLCP1 Gene
mRNA differential expression in normal tissues according to GTEx for CLCP1 Gene
This gene is overexpressed in Brain - Cerebellum (x13.1), Brain - Cerebellar Hemisphere (x10.2), Muscle - Skeletal (x4.3), and Liver (x4.2).
NURSA nuclear receptor signaling pathways regulating expression of CLCP1 Gene:
CLCP1
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CLCP1 Gene
Orthologs for CLCP1 Gene
No data available for Orthologs for CLCP1 Gene
Paralogs for CLCP1 Gene
No data available for Paralogs for CLCP1 Gene
Variants for CLCP1 Gene
Additional Variant Information for CLCP1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- CLCP1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CLCP1 Gene
Disorders for CLCP1 Gene
No disorders were found for CLCP1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CLCP1 Gene
Publications for CLCP1 Gene
No publications were found for CLCP1 Gene.
Products for CLCP1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Human Proteins and Enzymes
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CLCP1
- Origene Custom Protein Services for CLCP1
- Browse OriGene Inhibitory RNA Products For CLCP1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for CLCP1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For CLCP1
- GenScript: Custom all cDNA clones Services for CLCP1
- GenScript Custom Purified and Recombinant Proteins Services for CLCP1
- GenScript Custom Assay Services for CLCP1
- GenScript Custom overexpressing Cell Line Services for CLCP1
- Browse GenScript CRISPR for CLCP1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for CLCP1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse Sino Biological ELISA Kits
- Browse Sino Biological ELISA Pair Sets
- Browse Sino Biological CRO Services
- Browse Sino Biological Control Vectors
- Sino Biological Transfection Reagent
- Sino Biological Anti-His Tag Antibody
- Browse Antibodies at Cloud-Clone Corp.
- Browse Proteins at Cloud-Clone Corp.
- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for CLCP1
- VectorBuilder custom plasmid, inducible vectors for CLCP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CLCP1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for CLCP1
- Search GeneTex for Proteins for CLCP1
- Search ViGene Biosciences for CLCP1
Sources for CLCP1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems