Aliases for CLCP1 Gene

Aliases for CLCP1 Gene

  • Charcot-Leyden Crystal Protein Pseudogene 1 2 3 5
  • Charot-Leyden Crystal Protein Pseudogene 1 3
  • CLCP1 5

External Ids for CLCP1 Gene

Previous GeneCards Identifiers for CLCP1 Gene

  • GC22U990249
  • GC22M016277
  • GC22M017904

Summaries for CLCP1 Gene

GeneCards Summary for CLCP1 Gene

CLCP1 (Charcot-Leyden Crystal Protein Pseudogene 1) is a Pseudogene.

Additional gene information for CLCP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CLCP1 Gene

Genomics for CLCP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CLCP1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J017423 Enhancer 0.6 Ensembl 600.7 +0.8 812 0.7 CREB1 ATF7 ZNF629 FOXA1 ATF2 CTCF CREM ATF3 JUND NBN CLCP1 lnc-ATP6V1E1-5 CECR2 CECR3 ADA2 TERF2IPP1 SLC25A18
GH22J017424 Enhancer 0.2 Ensembl 600.7 +0.2 150 0.2 CLCP1 lnc-ATP6V1E1-5 CECR2 CECR3 ADA2 TERF2IPP1 SLC25A18
GH22J017436 Enhancer 0.8 ENCODE CraniofacialAtlas 0.4 -12.2 -12171 1.7 PRDM10 ZNF629 PRDM1 ZIC2 PATZ1 CTCF EZH2 ZBTB17 ZNF18 ETV1 CECR2 piR-41594-029 CLCP1 SLC25A18
GH22J017430 Enhancer 0.6 ENCODE 0.4 -5.9 -5860 0.9 ZBTB17 ATF2 ZFHX2 CEBPG ATF4 CEBPB ATF3 GLIS1 TRIM28 ZNF398 CECR2 CLCP1 piR-41594-029 SLC25A18
GH22J017443 Enhancer 0.6 ENCODE 0.4 -19.0 -18996 1.5 NR2C1 NR2C2 GABPA EHMT2 POLR2A ELF1 EZH2 PRDM6 ETV1 SMARCA4 CECR2 piR-41594-029 lnc-ATP6V1E1-4 CLCP1 SLC25A18
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CLCP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CLCP1 Gene

Genomic Locations for CLCP1 Gene
608 bases
Minus strand
608 bases
Minus strand

Genomic View for CLCP1 Gene

Genes around CLCP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CLCP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CLCP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CLCP1 Gene

Proteins for CLCP1 Gene

No data available for DME Specific Peptides for CLCP1 Gene

Domains & Families for CLCP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CLCP1 Gene

Function for CLCP1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CLCP1 Gene

Localization for CLCP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CLCP1 Gene

Pathways & Interactions for CLCP1 Gene

PathCards logo

SuperPathways for CLCP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CLCP1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CLCP1 Gene

Drugs & Compounds for CLCP1 Gene

No Compound Related Data Available

Transcripts for CLCP1 Gene

mRNA/cDNA for CLCP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CLCP1 Gene

No ASD Table

Relevant External Links for CLCP1 Gene

GeneLoc Exon Structure for

Expression for CLCP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CLCP1 Gene

mRNA differential expression in normal tissues according to GTEx for CLCP1 Gene

This gene is overexpressed in Brain - Cerebellum (x13.1), Brain - Cerebellar Hemisphere (x10.2), Muscle - Skeletal (x4.3), and Liver (x4.2).
genes like me logo Genes that share expression patterns with CLCP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CLCP1 Gene

Orthologs for CLCP1 Gene

Evolution for CLCP1 Gene

Gene Tree for CLCP1 (if available)
Gene Tree for CLCP1 (if available)

No data available for Orthologs for CLCP1 Gene

Paralogs for CLCP1 Gene

No data available for Paralogs for CLCP1 Gene

Variants for CLCP1 Gene

Additional Variant Information for CLCP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CLCP1 Gene

Disorders for CLCP1 Gene

No disorders were found for CLCP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CLCP1 Gene

Publications for CLCP1 Gene

No publications were found for CLCP1 Gene.

Products for CLCP1 Gene

Sources for CLCP1 Gene