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Aliases for CKS1BP2 Gene

Aliases for CKS1BP2 Gene

  • CDC28 Protein Kinase Regulatory Subunit 1B Pseudogene 2 2 3 5
  • Cell Division Control Protein CKS1 Pseudogene 3
  • BA192N10.2 3

External Ids for CKS1BP2 Gene

Previous GeneCards Identifiers for CKS1BP2 Gene

  • GC10P029991
  • GC10P030026
  • GC10P029987
  • GC10P029988

Summaries for CKS1BP2 Gene

GeneCards Summary for CKS1BP2 Gene

CKS1BP2 (CDC28 Protein Kinase Regulatory Subunit 1B Pseudogene 2) is a Pseudogene.

Additional gene information for CKS1BP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CKS1BP2 Gene

Genomics for CKS1BP2 Gene

GeneHancer (GH) Regulatory Elements for CKS1BP2 Gene

Promoters and enhancers for CKS1BP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I029699 Enhancer 0.5 ENCODE 550.8 +1.8 1758 0.9 ZNF217 ZNF121 CTCF GATA3 DPF2 CKS1BP2 GC10P029701 SVIL RNU6-908P
GH10I029582 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.3 -111.0 -110982 8.9 PKNOX1 CLOCK NEUROD1 RAD21 SCRT2 ZNF143 FOS RCOR1 EGR2 SMARCA5 SVIL MIR604 CKS1BP2 RNU6-908P SVIL-AS1 ENSG00000212411 MIR938
GH10I029317 Enhancer 1.1 Ensembl ENCODE 10.2 -379.1 -379067 2.2 PKNOX1 FOXA2 ZFP64 ARID4B SIN3A FEZF1 ZNF48 YY1 TCF12 SP3 LYZL1 CKS1BP2 LOC105376473
GH10I029039 Enhancer 0.7 ENCODE 10.2 -657.9 -657865 1.4 ZBTB6 ZNF473 SUZ12 YBX1 ZNF791 ZNF207 ZNF444 HES1 GATAD2B NR2F2 CKS1BP2 GC10M029997 GC10P029100
GH10I029702 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +5.2 5243 1.9 RXRA POLR2A NR2F1 HNF4G REST NR2F6 HNF4A SVIL RNU6-908P CKS1BP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CKS1BP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CKS1BP2 Gene

Genomic Locations for CKS1BP2 Gene
chr10:29,697,935-29,698,653
(GRCh38/hg38)
Size:
719 bases
Orientation:
Plus strand
chr10:29,986,832-29,987,582
(GRCh37/hg19)

Genomic View for CKS1BP2 Gene

Genes around CKS1BP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CKS1BP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CKS1BP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CKS1BP2 Gene

Proteins for CKS1BP2 Gene

Post-translational modifications for CKS1BP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CKS1BP2 Gene

Domains & Families for CKS1BP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CKS1BP2 Gene

Function for CKS1BP2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CKS1BP2 Gene

Localization for CKS1BP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CKS1BP2 Gene

Pathways & Interactions for CKS1BP2 Gene

SuperPathways for CKS1BP2 Gene

No Data Available

Interacting Proteins for CKS1BP2 Gene

Gene Ontology (GO) - Biological Process for CKS1BP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CKS1BP2 Gene

Drugs & Compounds for CKS1BP2 Gene

No Compound Related Data Available

Transcripts for CKS1BP2 Gene

mRNA/cDNA for CKS1BP2 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CKS1BP2 Gene

No ASD Table

Relevant External Links for CKS1BP2 Gene

GeneLoc Exon Structure for
CKS1BP2
ECgene alternative splicing isoforms for
CKS1BP2

Expression for CKS1BP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CKS1BP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of CKS1BP2 Gene:

CKS1BP2
genes like me logo Genes that share expression patterns with CKS1BP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CKS1BP2 Gene

Orthologs for CKS1BP2 Gene

Evolution for CKS1BP2 Gene

ENSEMBL:
Gene Tree for CKS1BP2 (if available)
TreeFam:
Gene Tree for CKS1BP2 (if available)

No data available for Orthologs for CKS1BP2 Gene

Paralogs for CKS1BP2 Gene

No data available for Paralogs for CKS1BP2 Gene

Variants for CKS1BP2 Gene

Additional Variant Information for CKS1BP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CKS1BP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CKS1BP2 Gene

Disorders for CKS1BP2 Gene

Additional Disease Information for CKS1BP2

Genetic Association Database
(GAD)

No disorders were found for CKS1BP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CKS1BP2 Gene

Publications for CKS1BP2 Gene

  1. Genome wide study of maternal and parent-of-origin effects on the etiology of orofacial clefts. (PMID: 22419666) Shi M … Beaty TH (American journal of medical genetics. Part A 2012) 44 58
  2. Genome-wide association study identifies variants associated with histologic features of nonalcoholic Fatty liver disease. (PMID: 20708005) Chalasani N … Nonalcoholic Steatohepatitis Clinical Research Network (Gastroenterology 2010) 44 58
  3. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 44 58
  4. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 44 58
  5. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 44 58

Products for CKS1BP2 Gene

Sources for CKS1BP2 Gene

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