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Aliases for CICP17 Gene

Subcategory (RNA class) for CICP17 Gene


Aliases for CICP17 Gene

  • Capicua Transcriptional Repressor Pseudogene 17 2 3 5

External Ids for CICP17 Gene

ORGUL Members for CICP17 Gene

Summaries for CICP17 Gene

GeneCards Summary for CICP17 Gene

CICP17 (Capicua Transcriptional Repressor Pseudogene 17) is a Pseudogene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for CICP17 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for CICP17

Additional gene information for CICP17 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for CICP17 Gene

Genomics for CICP17 Gene

GeneHancer (GH) Regulatory Elements for CICP17 Gene

Promoters and enhancers for CICP17 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I051375 Enhancer 1 ENCODE 0.4 -5.6 -5610 1.6 PKNOX1 ATF1 ARNT FEZF1 NCOA2 TCF12 ZNF766 GATA2 FOS ATF7 CICP17 GC07M051198
GH07I051356 Enhancer 1 ENCODE dbSUPER 0.3 -25.0 -25021 1.6 ELF3 FOXA2 MLX ARID4B RAD21 RARA YY1 MIXL1 RXRA ELF1 GC07M051198 COBL CICP17
GH07I051367 Enhancer 0.6 ENCODE 0.4 -15.0 -15046 0.2 CTCF ZNF654 DACH1 CBFA2T3 SIN3A REST RAD21 GATA3 ZNF184 ZNF143 GC07M051198 CICP17
GH07I051359 Enhancer 0.6 dbSUPER 0.3 -23.0 -22983 0.5 FOXA2 RXRA MAX ZNF384 RAD21 NR2F2 JUND ATF3 HNF4G ZBTB33 GC07M051198 CICP17
GH07I051376 Enhancer 0.4 ENCODE 0.4 -7.1 -7118 0 JUND ZMYM3 KDM1A CICP17 GC07M051198
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CICP17 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CICP17 Gene

Genomic Locations for CICP17 Gene
2,416 bases
Plus strand

Genomic View for CICP17 Gene

Genes around CICP17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CICP17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CICP17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CICP17 Gene

ORGUL Member Location for CICP17 Gene

ORGUL Member Location for CICP17 gene

Proteins for CICP17 Gene

Post-translational modifications for CICP17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CICP17 Gene

Domains & Families for CICP17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CICP17 Gene

Function for CICP17 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CICP17 Gene

Localization for CICP17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CICP17 Gene

Pathways & Interactions for CICP17 Gene

SuperPathways for CICP17 Gene

No Data Available

Interacting Proteins for CICP17 Gene

Gene Ontology (GO) - Biological Process for CICP17 Gene


No data available for Pathways by source and SIGNOR curated interactions for CICP17 Gene

Drugs & Compounds for CICP17 Gene

No Compound Related Data Available

Transcripts for CICP17 Gene

fRNAdb Secondary structures for CICP17 Gene

  • FR037781

mRNA/cDNA for CICP17 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CICP17 Gene

No ASD Table

Relevant External Links for CICP17 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CICP17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CICP17 Gene

mRNA differential expression in normal tissues according to GTEx for CICP17 Gene

This gene is overexpressed in Testis (x11.3).

NURSA nuclear receptor signaling pathways regulating expression of CICP17 Gene:

genes like me logo Genes that share expression patterns with CICP17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CICP17 Gene

Orthologs for CICP17 Gene

Evolution for CICP17 Gene

Gene Tree for CICP17 (if available)
Gene Tree for CICP17 (if available)

No data available for Orthologs for CICP17 Gene

Paralogs for CICP17 Gene

No data available for Paralogs for CICP17 Gene

Variants for CICP17 Gene

Additional Variant Information for CICP17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CICP17 Gene

Disorders for CICP17 Gene

No disorders were found for CICP17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CICP17 Gene

Publications for CICP17 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  2. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for CICP17 Gene

Sources for CICP17 Gene

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