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Aliases for CICP13 Gene

Subcategory (RNA class) for CICP13 Gene


Aliases for CICP13 Gene

  • Capicua Transcriptional Repressor Pseudogene 13 2 3 5
  • Capicua Homolog (Drosophila) Pseudogene 13 2
  • Capicua Homolog Pseudogene 13 3

External Ids for CICP13 Gene

ORGUL Members for CICP13 Gene

Previous GeneCards Identifiers for CICP13 Gene

  • GC01P222642
  • GC01P193316

Summaries for CICP13 Gene

GeneCards Summary for CICP13 Gene

CICP13 (Capicua Transcriptional Repressor Pseudogene 13) is a Pseudogene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for CICP13 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for CICP13

Additional gene information for CICP13 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for CICP13 Gene

Genomics for CICP13 Gene

GeneHancer (GH) Regulatory Elements for CICP13 Gene

Promoters and enhancers for CICP13 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J221739 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 84.3 -726.1 -726107 5.3 FEZF1 DMAP1 IRF4 YY1 ZNF143 ZNF548 SP3 NFYC MEF2D ZNF610 DUSP10 CICP13 TAF1A ENSG00000272750 LOC105372945
GH01J222710 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 48.5 +244.4 244398 3.9 FEZF1 DMAP1 YY1 E2F8 ZNF143 SP3 NFYC MEF2D SSRP1 ZNF610 BROX AIDA CICP13 ENSG00000272750 TAF1A CAPN2 DISP1 MIA3 FAM177B GC01M222708
GH01J223142 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 41.8 +675.3 675260 2.4 HDGF PKNOX1 SMAD1 ARNT SIN3A ZNF2 YY1 POLR2B ZNF213 ZNF416 ENSG00000236846 TLR5 CICP5 CICP13 TAF1A ENSG00000272750 LOC100287497 FBXO28
GH01J222643 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 25.7 +176.4 176360 2.7 HDGF FOXA2 SMAD1 ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B ZNF766 MIA3 CICP13 ENSG00000272750 ENSG00000229399
GH01J222588 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 26.8 +121.7 121741 2.2 FOXA2 PKNOX1 CLOCK SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 TAF1A TAF1A-AS1 CICP13 ENSG00000272750 HHIPL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CICP13 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CICP13 Gene

Genomic Locations for CICP13 Gene
2,789 bases
Plus strand
2,789 bases
Plus strand

Genomic View for CICP13 Gene

Genes around CICP13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CICP13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CICP13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CICP13 Gene

ORGUL Member Location for CICP13 Gene

ORGUL Member Location for CICP13 gene

Function for CICP13 Gene

Phenotypes From GWAS Catalog for CICP13 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CICP13 Gene

Localization for CICP13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CICP13 Gene

Pathways & Interactions for CICP13 Gene

SuperPathways for CICP13 Gene

No Data Available

Interacting Proteins for CICP13 Gene

Gene Ontology (GO) - Biological Process for CICP13 Gene


No data available for Pathways by source and SIGNOR curated interactions for CICP13 Gene

Drugs & Compounds for CICP13 Gene

No Compound Related Data Available

Transcripts for CICP13 Gene

fRNAdb Secondary structures for CICP13 Gene

  • FR084220

mRNA/cDNA for CICP13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CICP13 Gene

No ASD Table

Relevant External Links for CICP13 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CICP13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CICP13 Gene

NURSA nuclear receptor signaling pathways regulating expression of CICP13 Gene:

genes like me logo Genes that share expression patterns with CICP13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CICP13 Gene

Orthologs for CICP13 Gene

Evolution for CICP13 Gene

Gene Tree for CICP13 (if available)
Gene Tree for CICP13 (if available)

No data available for Orthologs for CICP13 Gene

Paralogs for CICP13 Gene

No data available for Paralogs for CICP13 Gene

Variants for CICP13 Gene

Additional Variant Information for CICP13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CICP13 Gene

Disorders for CICP13 Gene

Additional Disease Information for CICP13

Genetic Association Database

No disorders were found for CICP13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CICP13 Gene

Publications for CICP13 Gene

  1. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D … Mitchell GF (BMC medical genetics 2007) 44 58
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for CICP13 Gene

Sources for CICP13 Gene

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