Aliases for CHORDC2P Gene

Aliases for CHORDC2P Gene

  • Cysteine And Histidine Rich Domain Containing 2, Pseudogene 2 3 5
  • Cysteine And Histidine-Rich Domain (CHORD)-Containing 2 Pseudogene 2 3
  • Cysteine And Histidine-Rich Domain (CHORD) Containing 2 Pseudogene 2

External Ids for CHORDC2P Gene

Previous GeneCards Identifiers for CHORDC2P Gene

  • GC14U900028
  • GC14M088192
  • GC14M089272
  • GC14M090201
  • GC14M089803
  • GC14M090064
  • GC14M092320
  • GC14M092415
  • GC14M092445
  • GC14M090202
  • GC14M090496
  • GC14M090817
  • GC14M091092
  • GC14M091385
  • GC14M091671
  • GC14M091959
  • GC14M092220

Summaries for CHORDC2P Gene

GeneCards Summary for CHORDC2P Gene

CHORDC2P (Cysteine And Histidine Rich Domain Containing 2, Pseudogene) is a Pseudogene.

Additional gene information for CHORDC2P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CHORDC2P Gene

Genomics for CHORDC2P Gene

GeneHancer (GH) Regulatory Elements for CHORDC2P Gene

Promoters and enhancers for CHORDC2P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J089740 Enhancer 0.5 ENCODE 500.7 -1.9 -1930 0.2 ZNF217 CUX1 CTBP1 DPF2 GATA3 SMARCE1 FOXA1 CHORDC2P piR-38351-159 ENSG00000259053
GH14J089736 Enhancer 0.4 Ensembl 500.7 +1.5 1541 1.4 CEBPB HLF GATA3 CHORDC2P RN7SKP107 FOXN3 RN7SKP255 lnc-TDP1-3 ENSG00000259053
GH14J089718 Enhancer 0.9 FANTOM5 ENCODE 0.4 +17.4 17429 4.4 RFX1 ATF2 TCF12 CREB1 CTCF SPI1 GABPA EBF1 RAD21 MAX FOXN3 ENSG00000252655 RN7SKP107 TDP1 RN7SKP255 lnc-TDP1-3 CHORDC2P ENSG00000259053
GH14J089723 Enhancer 0.6 ENCODE CraniofacialAtlas 0.4 +13.8 13753 1.5 FOXA2 SPI1 RXRA HNF4A FOXA1 SP1 RN7SKP107 FOXN3 ENSG00000252655 RN7SKP255 lnc-TDP1-3 CHORDC2P ENSG00000259053
GH14J089742 Enhancer 0.5 Ensembl 0.4 -5.4 -5359 1.2 SKI SMAD4 BCL6 RARA ELF3 RXRA ELF1 RXRB HNF4G CHORDC2P piR-38351-159 ENSG00000259053
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CHORDC2P on UCSC Golden Path with GeneCards custom track

Genomic Locations for CHORDC2P Gene

Genomic Locations for CHORDC2P Gene
chr14:89,734,678-89,738,442
(GRCh38/hg38)
Size:
3,765 bases
Orientation:
Minus strand
chr14:90,201,022-90,204,786
(GRCh37/hg19)
Size:
3,765 bases
Orientation:
Minus strand

Genomic View for CHORDC2P Gene

Genes around CHORDC2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CHORDC2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CHORDC2P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CHORDC2P Gene

Proteins for CHORDC2P Gene

Post-translational modifications for CHORDC2P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CHORDC2P Gene

Domains & Families for CHORDC2P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CHORDC2P Gene

Function for CHORDC2P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CHORDC2P Gene

Localization for CHORDC2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CHORDC2P Gene

Pathways & Interactions for CHORDC2P Gene

PathCards logo

SuperPathways for CHORDC2P Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for CHORDC2P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CHORDC2P Gene

Drugs & Compounds for CHORDC2P Gene

No Compound Related Data Available

Transcripts for CHORDC2P Gene

mRNA/cDNA for CHORDC2P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for CHORDC2P Gene

No ASD Table

Relevant External Links for CHORDC2P Gene

GeneLoc Exon Structure for
CHORDC2P

Expression for CHORDC2P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CHORDC2P Gene

mRNA differential expression in normal tissues according to GTEx for CHORDC2P Gene

This gene is overexpressed in Brain - Hippocampus (x5.4), Brain - Amygdala (x5.3), Brain - Substantia nigra (x5.0), Brain - Cerebellar Hemisphere (x4.7), Brain - Caudate (basal ganglia) (x4.7), Brain - Putamen (basal ganglia) (x4.2), and Testis (x4.0).
genes like me logo Genes that share expression patterns with CHORDC2P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CHORDC2P Gene

Orthologs for CHORDC2P Gene

Evolution for CHORDC2P Gene

ENSEMBL:
Gene Tree for CHORDC2P (if available)
TreeFam:
Gene Tree for CHORDC2P (if available)

No data available for Orthologs for CHORDC2P Gene

Paralogs for CHORDC2P Gene

No data available for Paralogs for CHORDC2P Gene

Variants for CHORDC2P Gene

Additional Variant Information for CHORDC2P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CHORDC2P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CHORDC2P Gene

Disorders for CHORDC2P Gene

Additional Disease Information for CHORDC2P

Genetic Association Database
(GAD)

No disorders were found for CHORDC2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CHORDC2P Gene

Publications for CHORDC2P Gene

  1. Genome-wide association study of electrocardiographic and heart rate variability traits: the Framingham Heart Study. (PMID: 17903306) Newton-Cheh C … Larson MG (BMC medical genetics 2007) 41 54

Products for CHORDC2P Gene

Sources for CHORDC2P Gene