Aliases for CHORDC1P5 Gene

Aliases for CHORDC1P5 Gene

  • CHORDC1 Pseudogene 5 2 3 5
  • Cysteine And Histidine-Rich Domain (CHORD) Containing 1 Pseudogene 3
  • Cysteine And Histidine Rich Domain Containing 1 Pseudogene 3
  • CHORDC1P5 5

External Ids for CHORDC1P5 Gene

Summaries for CHORDC1P5 Gene

GeneCards Summary for CHORDC1P5 Gene

CHORDC1P5 (CHORDC1 Pseudogene 5) is a Pseudogene.

Additional gene information for CHORDC1P5 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CHORDC1P5 Gene

Genomics for CHORDC1P5 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CHORDC1P5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J070528 Enhancer 0.7 Ensembl 600.7 -1.5 -1540 1 CTCF PRDM10 ZNF692 PKNOX1 REST RAD21 ZNF24 CBX3 ZNF524 ZSCAN29 CHORDC1P5 lnc-CTH-10 PTGER3 lnc-ANKRD13C-3 lnc-CTH-11 CTH
GH01J070504 Enhancer 1.1 Ensembl ENCODE 0.3 -26.0 -26030 2.8 PRDM10 ZNF629 BACH1 JUND STAT3 PKNOX1 TCF12 IKZF2 RCOR1 SP1 ZRANB2 MIR186 lnc-ANKRD13C-3 CHORDC1P5 lnc-CTH-11 CTH PTGER3
GH01J070509 Enhancer 0.9 Ensembl 0.4 -20.6 -20572 1.3 CEBPG CTCF HNRNPL PRDM10 ZNF629 ZNF692 JUND FOXA1 PRDM1 ZSCAN4 ZRANB2 MIR186 lnc-ANKRD13C-3 CHORDC1P5 lnc-CTH-11 CTH PTGER3
GH01J070498 Enhancer 0.4 Ensembl 0.3 -30.5 -30530 2.6 SPI1 HLF PKNOX1 lnc-ANKRD13C-3 lnc-CTH-11 CHORDC1P5 CTH PTGER3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CHORDC1P5 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CHORDC1P5 Gene

Genomic Locations for CHORDC1P5 Gene
chr1:70,530,431-70,532,474
(GRCh38/hg38)
Size:
2,044 bases
Orientation:
Plus strand
chr1:70,996,092-70,998,157
(GRCh37/hg19)
Size:
2,066 bases
Orientation:
Plus strand

Genomic View for CHORDC1P5 Gene

Genes around CHORDC1P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CHORDC1P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CHORDC1P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CHORDC1P5 Gene

Proteins for CHORDC1P5 Gene

Post-translational modifications for CHORDC1P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CHORDC1P5 Gene

Domains & Families for CHORDC1P5 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CHORDC1P5 Gene

Function for CHORDC1P5 Gene

Phenotypes From GWAS Catalog for CHORDC1P5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CHORDC1P5 Gene

Localization for CHORDC1P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CHORDC1P5 Gene

Pathways & Interactions for CHORDC1P5 Gene

PathCards logo

SuperPathways for CHORDC1P5 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CHORDC1P5 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CHORDC1P5 Gene

Drugs & Compounds for CHORDC1P5 Gene

No Compound Related Data Available

Transcripts for CHORDC1P5 Gene

mRNA/cDNA for CHORDC1P5 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CHORDC1P5 Gene

No ASD Table

Relevant External Links for CHORDC1P5 Gene

GeneLoc Exon Structure for
CHORDC1P5

Expression for CHORDC1P5 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CHORDC1P5 Gene

Orthologs for CHORDC1P5 Gene

Evolution for CHORDC1P5 Gene

ENSEMBL:
Gene Tree for CHORDC1P5 (if available)
TreeFam:
Gene Tree for CHORDC1P5 (if available)

No data available for Orthologs for CHORDC1P5 Gene

Paralogs for CHORDC1P5 Gene

No data available for Paralogs for CHORDC1P5 Gene

Variants for CHORDC1P5 Gene

Additional Variant Information for CHORDC1P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CHORDC1P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CHORDC1P5 Gene

Disorders for CHORDC1P5 Gene

No disorders were found for CHORDC1P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CHORDC1P5 Gene

Publications for CHORDC1P5 Gene

No publications were found for CHORDC1P5 Gene.

No data available for Mastermind for CHORDC1P5 Gene

Products for CHORDC1P5 Gene

Sources for CHORDC1P5 Gene