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Aliases for CHMP1B2P Gene

Aliases for CHMP1B2P Gene

  • Charged Multivesicular Body Protein 1B2, Pseudogene 2 3 5

External Ids for CHMP1B2P Gene

Previous GeneCards Identifiers for CHMP1B2P Gene

  • GC0XM079529

Summaries for CHMP1B2P Gene

GeneCards Summary for CHMP1B2P Gene

CHMP1B2P (Charged Multivesicular Body Protein 1B2, Pseudogene) is a Pseudogene.

Additional gene information for CHMP1B2P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CHMP1B2P Gene

Genomics for CHMP1B2P Gene

GeneHancer (GH) Regulatory Elements for CHMP1B2P Gene

Promoters and enhancers for CHMP1B2P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI080334 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE 550.8 +0.1 63 1 CTCF POLR2A NRF1 ZBTB33 YY1 CHAMP1 CHMP1B2P FAM46D PIR60465
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CHMP1B2P on UCSC Golden Path with GeneCards custom track

Genomic Locations for CHMP1B2P Gene

Genomic Locations for CHMP1B2P Gene
chrX:80,228,489-80,335,364
(GRCh38/hg38)
Size:
106,876 bases
Orientation:
Minus strand
chrX:79,528,830-79,565,669
(GRCh37/hg19)

Genomic View for CHMP1B2P Gene

Genes around CHMP1B2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CHMP1B2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CHMP1B2P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CHMP1B2P Gene

Proteins for CHMP1B2P Gene

Post-translational modifications for CHMP1B2P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CHMP1B2P Gene

Domains & Families for CHMP1B2P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CHMP1B2P Gene

Function for CHMP1B2P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CHMP1B2P Gene

Localization for CHMP1B2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CHMP1B2P Gene

Pathways & Interactions for CHMP1B2P Gene

SuperPathways for CHMP1B2P Gene

No Data Available

Interacting Proteins for CHMP1B2P Gene

Gene Ontology (GO) - Biological Process for CHMP1B2P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CHMP1B2P Gene

Drugs & Compounds for CHMP1B2P Gene

No Compound Related Data Available

Transcripts for CHMP1B2P Gene

mRNA/cDNA for CHMP1B2P Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CHMP1B2P Gene

No ASD Table

Relevant External Links for CHMP1B2P Gene

GeneLoc Exon Structure for
CHMP1B2P
ECgene alternative splicing isoforms for
CHMP1B2P

Expression for CHMP1B2P Gene

mRNA differential expression in normal tissues according to GTEx for CHMP1B2P Gene

This gene is overexpressed in Adrenal Gland (x8.5).

NURSA nuclear receptor signaling pathways regulating expression of CHMP1B2P Gene:

CHMP1B2P

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CHMP1B2P Gene

Orthologs for CHMP1B2P Gene

Evolution for CHMP1B2P Gene

ENSEMBL:
Gene Tree for CHMP1B2P (if available)
TreeFam:
Gene Tree for CHMP1B2P (if available)

No data available for Orthologs for CHMP1B2P Gene

Paralogs for CHMP1B2P Gene

No data available for Paralogs for CHMP1B2P Gene

Variants for CHMP1B2P Gene

Sequence variations from dbSNP and Humsavar for CHMP1B2P Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1000041033 -- 80,275,187(-) A/C intron_variant
rs1000079948 -- 80,260,514(-) A/G intron_variant
rs1000082197 -- 80,246,694(-) C/G intron_variant
rs1000098720 -- 80,284,717(-) T/G intron_variant
rs1000141754 -- 80,323,379(-) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for CHMP1B2P Gene

Variant ID Type Subtype PubMed ID
nsv510544 OTHER sequence alteration 20534489
esv1325906 CNV insertion 17803354
esv1030202 CNV insertion 17803354

Additional Variant Information for CHMP1B2P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CHMP1B2P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CHMP1B2P Gene

Disorders for CHMP1B2P Gene

Additional Disease Information for CHMP1B2P

No disorders were found for CHMP1B2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CHMP1B2P Gene

Publications for CHMP1B2P Gene

No publications were found for CHMP1B2P Gene.

Products for CHMP1B2P Gene

Sources for CHMP1B2P Gene

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