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Aliases for CHIAP1 Gene
Aliases for CHIAP1 Gene
External Ids for CHIAP1 Gene
- HGNC: 44462
- Entrez Gene: 100420342
- Ensembl: ENSG00000236040
Previous GeneCards Identifiers for CHIAP1 Gene
- GC01P111795
Summaries for CHIAP1 Gene
GeneCards Summary for CHIAP1 Gene
CHIAP1 (Chitinase, Acidic Pseudogene 1) is a Pseudogene.
Additional gene information for CHIAP1 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CHIAP1 Gene
Genomics for CHIAP1 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for CHIAP1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J111250 | Enhancer | 0.5 | ENCODE | 600.7 | -0.1 | -90 | 0.1 | SOX13 KDM1A TEAD3 SOX5 ZNF644 | CHIAP1 HSALNG0006031 CHIA DENND2D | |
| GH01J111249 | Enhancer | 0.5 | Ensembl | 600.7 | -0.4 | -353 | 0.2 | SOX13 KDM1A TEAD3 SOX5 ZNF644 | CHIAP1 CHI3L2 HSALNG0006031 CHIA DENND2D | |
| GH01J111251 | Enhancer | 0.2 | Ensembl | 600.7 | +1.5 | 1547 | 1.6 | CHIAP1 CHI3L2 CHIAP2 CHIA DENND2D | ||
| GH01J111242 | Enhancer | 0.7 | Ensembl dbSUPER | 0.4 | -7.2 | -7153 | 0.6 | SOX13 FOXP1 RARA KDM1A TEAD3 HMG20A SOX5 ELF3 | CHI3L2 DENND2D OVGP1 HSALNG0006031 CHIAP1 CHIA | |
| GH01J111275 | Enhancer | 0.7 | Ensembl ENCODE | 0.3 | +25.0 | 25047 | 1.4 | SCRT2 RUNX3 USF1 FOSL1 FOXA1 MNT USF2 | CHIAP2 CHIA CHIAP1 DENND2D |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around CHIAP1 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for CHIAP1 Gene
Genomic Locations for CHIAP1 Gene
- chr1:111,250,254-111,256,716
- (GRCh38/hg38)
- Size:
- 6,463 bases
- Orientation:
- Plus strand
- chr1:111,792,876-111,799,338
- (GRCh37/hg19)
- Size:
- 6,463 bases
- Orientation:
- Plus strand
Genomic View for CHIAP1 Gene
Genes around CHIAP1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1p13.2 by HGNC
- 1p13.2 by Entrez Gene
- 1p13.2 by Ensembl
CHIAP1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for CHIAP1 Gene
Proteins for CHIAP1 Gene
Post-translational modifications for CHIAP1 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CHIAP1
- Origene Custom Protein Services for CHIAP1
No data available for DME Specific Peptides for CHIAP1 Gene
Domains & Families for CHIAP1 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CHIAP1 Gene
Function for CHIAP1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CHIAP1 Gene
Localization for CHIAP1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CHIAP1 Gene
Transcripts for CHIAP1 Gene
mRNA/cDNA for CHIAP1 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000456220 995 nts (view in UCSC)
CRISPR Products
- Browse CRISPR knockouts for CHIAP1
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for CHIAP1 Gene
- GeneLoc Exon Structure for
- CHIAP1
Expression for CHIAP1 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CHIAP1 Gene
Orthologs for CHIAP1 Gene
No data available for Orthologs for CHIAP1 Gene
Paralogs for CHIAP1 Gene
No data available for Paralogs for CHIAP1 Gene
Variants for CHIAP1 Gene
Additional Variant Information for CHIAP1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- CHIAP1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CHIAP1 Gene
Disorders for CHIAP1 Gene
No disorders were found for CHIAP1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CHIAP1 Gene
Publications for CHIAP1 Gene
No publications were found for CHIAP1 Gene.
No data available for Mastermind for CHIAP1 Gene
Products for CHIAP1 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CHIAP1
- Origene Custom Protein Services for CHIAP1
- Browse OriGene Inhibitory RNA Products For CHIAP1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for CHIAP1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For CHIAP1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for CHIAP1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for CHIAP1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for CHIAP1
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for CHIAP1
Sources for CHIAP1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB