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Aliases for CHEK1 Gene

Aliases for CHEK1 Gene

  • Checkpoint Kinase 1 2 3 5
  • Cell Cycle Checkpoint Kinase 3 4
  • CHK1 Checkpoint Homolog 3 4
  • CHK1 3 4
  • Serine/Threonine-Protein Kinase Chk1 3
  • Checkpoint, S. Pombe, Homolog Of, 1 3
  • CHK1 (Checkpoint, S.Pombe) Homolog 2
  • CHK1 Checkpoint Homolog (S. Pombe) 2
  • Checkpoint Kinase-1 4
  • EC 2.7.11.1 4
  • Chk1-S 3

External Ids for CHEK1 Gene

Previous GeneCards Identifiers for CHEK1 Gene

  • GC11P127497
  • GC11P127009
  • GC11P125529
  • GC11P125033
  • GC11P125001
  • GC11P125495
  • GC11P121436

Summaries for CHEK1 Gene

Entrez Gene Summary for CHEK1 Gene

  • The protein encoded by this gene belongs to the Ser/Thr protein kinase family. It is required for checkpoint mediated cell cycle arrest in response to DNA damage or the presence of unreplicated DNA. This protein acts to integrate signals from ATM and ATR, two cell cycle proteins involved in DNA damage responses, that also associate with chromatin in meiotic prophase I. Phosphorylation of CDC25A protein phosphatase by this protein is required for cells to delay cell cycle progression in response to double-strand DNA breaks. Several alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Oct 2011]

CIViC summary for CHEK1 Gene

GeneCards Summary for CHEK1 Gene

CHEK1 (Checkpoint Kinase 1) is a Protein Coding gene. Diseases associated with CHEK1 include Ataxia-Telangiectasia and Breast Cancer. Among its related pathways are Gene Expression and Akt Signaling. Gene Ontology (GO) annotations related to this gene include transferase activity, transferring phosphorus-containing groups and protein tyrosine kinase activity. An important paralog of this gene is SBK1.

UniProtKB/Swiss-Prot for CHEK1 Gene

  • Serine/threonine-protein kinase which is required for checkpoint-mediated cell cycle arrest and activation of DNA repair in response to the presence of DNA damage or unreplicated DNA. May also negatively regulate cell cycle progression during unperturbed cell cycles. This regulation is achieved by a number of mechanisms that together help to preserve the integrity of the genome. Recognizes the substrate consensus sequence [R-X-X-S/T]. Binds to and phosphorylates CDC25A, CDC25B and CDC25C. Phosphorylation of CDC25A at Ser-178 and Thr-507 and phosphorylation of CDC25C at Ser-216 creates binding sites for 14-3-3 proteins which inhibit CDC25A and CDC25C. Phosphorylation of CDC25A at Ser-76, Ser-124, Ser-178, Ser-279 and Ser-293 promotes proteolysis of CDC25A. Phosphorylation of CDC25A at Ser-76 primes the protein for subsequent phosphorylation at Ser-79, Ser-82 and Ser-88 by NEK11, which is required for polyubiquitination and degradation of CDCD25A. Inhibition of CDC25 leads to increased inhibitory tyrosine phosphorylation of CDK-cyclin complexes and blocks cell cycle progression. Also phosphorylates NEK6. Binds to and phosphorylates RAD51 at Thr-309, which promotes the release of RAD51 from BRCA2 and enhances the association of RAD51 with chromatin, thereby promoting DNA repair by homologous recombination. Phosphorylates multiple sites within the C-terminus of TP53, which promotes activation of TP53 by acetylation and promotes cell cycle arrest and suppression of cellular proliferation. Also promotes repair of DNA cross-links through phosphorylation of FANCE. Binds to and phosphorylates TLK1 at Ser-743, which prevents the TLK1-dependent phosphorylation of the chromatin assembly factor ASF1A. This may enhance chromatin assembly both in the presence or absence of DNA damage. May also play a role in replication fork maintenance through regulation of PCNA. May regulate the transcription of genes that regulate cell-cycle progression through the phosphorylation of histones. Phosphorylates histone H3.1 (to form H3T11ph), which leads to epigenetic inhibition of a subset of genes. May also phosphorylate RB1 to promote its interaction with the E2F family of transcription factors and subsequent cell cycle arrest.

  • Isoform 2: Endogenous repressor of isoform 1, interacts with, and antagonizes CHK1 to promote the S to G2/M phase transition.

Tocris Summary for CHEK1 Gene

  • Checkpoint kinases (Chks) are serine/threonine kinases that are involved in the control of the cell cycle. Two subtypes have so far been identified, Chk1 and Chk2. They are essential components to delay cell cycle progression in all cells and act at all three cell cycle checkpoints.

Gene Wiki entry for CHEK1 Gene

Additional gene information for CHEK1 Gene

No data available for PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CHEK1 Gene

Genomics for CHEK1 Gene

GeneHancer (GH) Regulatory Elements for CHEK1 Gene

Promoters and enhancers for CHEK1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J125624 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 662.9 +1.2 1150 3.4 MLX ZFP64 DMAP1 YY1 ZNF213 E2F8 ZNF143 ZNF548 SP3 MEF2D CHEK1 HP11014 TMEM218 TIRAP MSANTD2 FEZ1 STT3A CCDC15 ACRV1 PUS3
GH11J125591 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 22.7 -32.2 -32186 3.1 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 YY1 SLC30A9 POLR2B STT3A FEZ1 STT3A-AS1 HP11014 TMEM218 CHEK1 TIRAP MSANTD2 ENSG00000254509 ENSG00000254694
GH11J125511 Enhancer 1.3 FANTOM5 Ensembl ENCODE 18.2 -110.1 -110061 6 HDAC1 PKNOX1 ATF1 STAT5A BMI1 ZBTB40 KLF5 ZNF121 ZNF766 ZNF143 CHEK1 FEZ1 EI24 RNU6-1156P DDX25 SLC37A2
GH11J125886 Promoter/Enhancer 1.5 Ensembl ENCODE 6.4 +262.8 262838 2.1 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B ZNF207 GC11P125889 PIR58536 HP11014 TMEM218 STT3A CHEK1 DDX25 PUS3 HYLS1 PIR36090
GH11J125621 Enhancer 0.6 ENCODE 10.6 -2.7 -2722 1 OSR2 JUND ZBTB48 JUN HLF CEBPB OVOL3 FOS EP300 CHEK1 FEZ1 STT3A-AS1 STT3A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CHEK1 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the CHEK1 gene promoter:
  • p53
  • AP-1
  • ATF-2
  • c-Jun
  • NF-AT1

Genomic Locations for CHEK1 Gene

Genomic Locations for CHEK1 Gene
chr11:125,624,920-125,676,259
(GRCh38/hg38)
Size:
51,340 bases
Orientation:
Plus strand
chr11:125,495,036-125,546,150
(GRCh37/hg19)
Size:
51,115 bases
Orientation:
Plus strand

Genomic View for CHEK1 Gene

Genes around CHEK1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CHEK1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CHEK1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CHEK1 Gene

Proteins for CHEK1 Gene

  • Protein details for CHEK1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O14757-CHK1_HUMAN
    Recommended name:
    Serine/threonine-protein kinase Chk1
    Protein Accession:
    O14757
    Secondary Accessions:
    • A8K934
    • B4DDD0
    • B4DSK3
    • B5BTY6
    • F5H7S4
    • H2BI51

    Protein attributes for CHEK1 Gene

    Size:
    476 amino acids
    Molecular mass:
    54434 Da
    Quaternary structure:
    • Interacts (phosphorylated by ATR) with RAD51. Interacts with and phosphorylates CLSPN, an adapter protein that regulates the ATR-dependent phosphorylation of CHEK1. Interacts with BRCA1. Interacts with and phosphorylates CDC25A, CDC25B and CDC25C. Interacts with FBXO6, which regulates CHEK1. Interacts with PPM1D, which regulates CHEK1 through dephosphorylation. Interacts with TIMELESS; DNA damage-dependent. Interacts with FEM1B; activates CHEK1 in response to stress. Interacts with TLK1. Interacts with XPO1 and YWHAZ. Isoform 1 associates with isoform 2, the interaction is disrupted upon phosphorylation by ATR. Interacts with CDK5RAP3; antagonizes CHEK1 (PubMed:19223857).

    Three dimensional structures from OCA and Proteopedia for CHEK1 Gene

    Alternative splice isoforms for CHEK1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for CHEK1 Gene

Post-translational modifications for CHEK1 Gene

  • Phosphorylated by ATR in a RAD17-dependent manner in response to ultraviolet irradiation and inhibition of DNA replication. Phosphorylated by ATM in response to ionizing irradiation. ATM and ATR can both phosphorylate Ser-317 and Ser-345 and this results in enhanced kinase activity. Phosphorylation at Ser-345 induces a change in the conformation of the protein, activates the kinase activity and is a prerequisite for interaction with FBXO6 and subsequent ubiquitination at Lys-436. Phosphorylation at Ser-345 also increases binding to 14-3-3 proteins and promotes nuclear retention. Conversely, dephosphorylation at Ser-345 by PPM1D may contribute to exit from checkpoint mediated cell cycle arrest. Phosphorylation at Ser-280 by AKT1/PKB, may promote mono and/or diubiquitination. Also phosphorylated at undefined residues during mitotic arrest, resulting in decreased activity.
  • Ubiquitinated. Mono or diubiquitination promotes nuclear exclusion (By similarity). The activated form (phosphorylated on Ser-345) is polyubiquitinated at Lys-436 by some SCF-type E3 ubiquitin ligase complex containing FBXO6 promoting its degradation. Ubiquitination and degradation are required to terminate the checkpoint and ensure that activated CHEK1 does not accumulate as cells progress through S phase, when replication forks encounter transient impediments during normal DNA replication.
  • Ubiquitination at Lys436, Lys244, and Lys180
  • Modification sites at PhosphoSitePlus

Antibody Products

  • Abcam antibodies for CHEK1

No data available for DME Specific Peptides for CHEK1 Gene

Domains & Families for CHEK1 Gene

Gene Families for CHEK1 Gene

IUPHAR :
Human Protein Atlas (HPA):
  • Cancer-related genes
  • Enzymes
  • Plasma proteins
  • Predicted intracellular proteins

Suggested Antigen Peptide Sequences for CHEK1 Gene

Graphical View of Domain Structure for InterPro Entry

O14757

UniProtKB/Swiss-Prot:

CHK1_HUMAN :
  • The autoinhibitory region (AIR) inhibits the activity of the kinase domain.
  • Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. NIM1 subfamily.
Domain:
  • The autoinhibitory region (AIR) inhibits the activity of the kinase domain.
Family:
  • Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. NIM1 subfamily.
genes like me logo Genes that share domains with CHEK1: view

Function for CHEK1 Gene

Molecular function for CHEK1 Gene

UniProtKB/Swiss-Prot Function:
Serine/threonine-protein kinase which is required for checkpoint-mediated cell cycle arrest and activation of DNA repair in response to the presence of DNA damage or unreplicated DNA. May also negatively regulate cell cycle progression during unperturbed cell cycles. This regulation is achieved by a number of mechanisms that together help to preserve the integrity of the genome. Recognizes the substrate consensus sequence [R-X-X-S/T]. Binds to and phosphorylates CDC25A, CDC25B and CDC25C. Phosphorylation of CDC25A at Ser-178 and Thr-507 and phosphorylation of CDC25C at Ser-216 creates binding sites for 14-3-3 proteins which inhibit CDC25A and CDC25C. Phosphorylation of CDC25A at Ser-76, Ser-124, Ser-178, Ser-279 and Ser-293 promotes proteolysis of CDC25A. Phosphorylation of CDC25A at Ser-76 primes the protein for subsequent phosphorylation at Ser-79, Ser-82 and Ser-88 by NEK11, which is required for polyubiquitination and degradation of CDCD25A. Inhibition of CDC25 leads to increased inhibitory tyrosine phosphorylation of CDK-cyclin complexes and blocks cell cycle progression. Also phosphorylates NEK6. Binds to and phosphorylates RAD51 at Thr-309, which promotes the release of RAD51 from BRCA2 and enhances the association of RAD51 with chromatin, thereby promoting DNA repair by homologous recombination. Phosphorylates multiple sites within the C-terminus of TP53, which promotes activation of TP53 by acetylation and promotes cell cycle arrest and suppression of cellular proliferation. Also promotes repair of DNA cross-links through phosphorylation of FANCE. Binds to and phosphorylates TLK1 at Ser-743, which prevents the TLK1-dependent phosphorylation of the chromatin assembly factor ASF1A. This may enhance chromatin assembly both in the presence or absence of DNA damage. May also play a role in replication fork maintenance through regulation of PCNA. May regulate the transcription of genes that regulate cell-cycle progression through the phosphorylation of histones. Phosphorylates histone H3.1 (to form H3T11ph), which leads to epigenetic inhibition of a subset of genes. May also phosphorylate RB1 to promote its interaction with the E2F family of transcription factors and subsequent cell cycle arrest.
UniProtKB/Swiss-Prot Function:
Isoform 2: Endogenous repressor of isoform 1, interacts with, and antagonizes CHK1 to promote the S to G2/M phase transition.
UniProtKB/Swiss-Prot CatalyticActivity:
ATP + a protein = ADP + a phosphoprotein.
UniProtKB/Swiss-Prot EnzymeRegulation:
Activated through phosphorylation predominantly by ATR but also by ATM in response to DNA damage or inhibition of DNA replication. Activation is modulated by several mediators including CLSPN, BRCA1 and FEM1B.
GENATLAS Biochemistry:
checkpoint,S pombe homolog 1,component of the G2/M checkpoint,phosphorylating and inactivating CDC25C,required for cell cycle arrest in reponse to DNA damage,in association with 14.3.3 proteins (YWHA*),altered in colon and endometrial tumors

Enzyme Numbers (IUBMB) for CHEK1 Gene

Phenotypes From GWAS Catalog for CHEK1 Gene

Gene Ontology (GO) - Molecular Function for CHEK1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000166 nucleotide binding IEA --
GO:0004672 protein kinase activity IMP 22024163
GO:0004674 protein serine/threonine kinase activity TAS --
GO:0005515 protein binding IPI 11836499
GO:0005524 ATP binding IEA --
genes like me logo Genes that share ontologies with CHEK1: view

Phenotypes for CHEK1 Gene

MGI mutant phenotypes for CHEK1:
inferred from 4 alleles
GenomeRNAi human phenotypes for CHEK1:
genes like me logo Genes that share phenotypes with CHEK1: view

Animal Models for CHEK1 Gene

MGI Knock Outs for CHEK1:

Animal Model Products

miRNA for CHEK1 Gene

Clone Products

  • Addgene plasmids for CHEK1

No data available for Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for CHEK1 Gene

Localization for CHEK1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CHEK1 Gene

Nucleus. Cytoplasm. Cytoplasm, cytoskeleton, microtubule organizing center, centrosome. Note=Nuclear export is mediated at least in part by XPO1/CRM1. Also localizes to the centrosome specifically during interphase, where it may protect centrosomal CDC2 kinase from inappropriate activation by cytoplasmic CDC25B.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for CHEK1 gene
Compartment Confidence
extracellular 5
cytoskeleton 5
nucleus 5
cytosol 5
mitochondrion 2

Subcellular locations from the

Human Protein Atlas (HPA)
  • Nucleoplasm (2)
  • Vesicles (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for CHEK1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000781 colocalizes_with chromosome, telomeric region IDA 15149599
GO:0000785 chromatin ISS --
GO:0000794 condensed nuclear chromosome IDA 9382850
GO:0005615 extracellular space HDA 23580065
GO:0005634 nucleus IEA,IDA 15311285
genes like me logo Genes that share ontologies with CHEK1: view

Pathways & Interactions for CHEK1 Gene

genes like me logo Genes that share pathways with CHEK1: view

SIGNOR curated interactions for CHEK1 Gene

Activates:
Inactivates:
Is activated by:
Is inactivated by:
Other effect:

Gene Ontology (GO) - Biological Process for CHEK1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000077 DNA damage checkpoint IMP 19716789
GO:0000086 G2/M transition of mitotic cell cycle IEA --
GO:0001833 inner cell mass cell proliferation IEA --
GO:0006260 DNA replication TAS --
GO:0006281 DNA repair IMP 19716789
genes like me logo Genes that share ontologies with CHEK1: view

Drugs & Compounds for CHEK1 Gene

(83) Drugs for CHEK1 Gene - From: DrugBank, DGIdb, HMDB, Tocris, and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Lacosamide Approved Pharma inhibitor Checkpoint kinase inhibitor,ATP competitive, Checkpoint kinase (Chk) inhibitor 82
fostamatinib Approved, Investigational Pharma Target, inhibitor Kinase Inhibitors 0
Floxuridine Approved Pharma Antineoplastic antimetabolite, RNA and DNA synthesis inhibitor, Inhibitor of thymidylate synthetase; anticancer agent 50
(2R)-1-[(5,6-DIPHENYL-7H-PYRROLO[2,3-D]PYRIMIDIN-4-YL)AMINO]PROPAN-2-OL Experimental Pharma Target 0
(2R)-3-{[(4Z)-5,6-DIPHENYL-6,7-DIHYDRO-4H-PYRROLO[2,3-D]PYRIMIDIN-4-YLIDENE]AMINO}PROPANE-1,2-DIOL Experimental Pharma Target 0

(25) Additional Compounds for CHEK1 Gene - From: Novoseek, HMDB, and Tocris

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
ADP
  • 5'-Adenylphosphoric acid
  • Adenosine 5'-diphosphate
  • ADENOSINE-5'-diphosphATE
  • H3ADP
  • 5'-Adenylphosphate
Full agonist, Agonist, Partial agonist, Antagonist, Gating inhibitor 58-64-0
DIM
1968-05-4
PD 407824
622864-54-4

(5) Tocris Compounds for CHEK1 Gene

Compound Action Cas Number
DIM Activates Chk2; induces G2/M cell cycle arrest 1968-05-4
NSC 109555 ditosylate Selective Chk2 inhibitor 66748-43-4
PD 407824 Selective inhibitor of Chk1 and Wee1 622864-54-4
SB 218078 Inhibitor of checkpoint kinase 1 (Chk1) 135897-06-2
TCS 2312 Potent Chk1 inhibitor 838823-31-7
genes like me logo Genes that share compounds with CHEK1: view

Transcripts for CHEK1 Gene

Unigene Clusters for CHEK1 Gene

Checkpoint kinase 1:
Representative Sequences:

Clone Products

  • Addgene plasmids for CHEK1

Alternative Splicing Database (ASD) splice patterns (SP) for CHEK1 Gene

ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b · 2c ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7a · 7b ^ 8 ^ 9a · 9b · 9c · 9d ^ 10a · 10b ^ 11 ^ 12 ^ 13a · 13b ^ 14 ^
SP1: -
SP2: -
SP3: - - - - - -
SP4:
SP5: - - - - - - -
SP6: - - - - -
SP7: -
SP8: -
SP9: - -
SP10: - -
SP11:

ExUns: 15 ^ 16
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:
SP10:
SP11:

Relevant External Links for CHEK1 Gene

GeneLoc Exon Structure for
CHEK1
ECgene alternative splicing isoforms for
CHEK1

Expression for CHEK1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CHEK1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for CHEK1 Gene

This gene is overexpressed in Breast (62.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for CHEK1 Gene



Protein tissue co-expression partners for CHEK1 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of CHEK1 Gene:

CHEK1

SOURCE GeneReport for Unigene cluster for CHEK1 Gene:

Hs.24529

mRNA Expression by UniProt/SwissProt for CHEK1 Gene:

O14757-CHK1_HUMAN
Tissue specificity: Expressed ubiquitously with the most abundant expression in thymus, testis, small intestine and colon.

Evidence on tissue expression from TISSUES for CHEK1 Gene

  • Nervous system(4.6)
  • Bone marrow(4.4)
  • Muscle(4)
  • Intestine(2.8)
  • Blood(2)
genes like me logo Genes that share expression patterns with CHEK1: view

No data available for mRNA differential expression in normal tissues and Phenotype-based relationships between genes and organs from Gene ORGANizer for CHEK1 Gene

Orthologs for CHEK1 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for CHEK1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CHEK1 34 33
  • 99.72 (n)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia CHEK1 34
  • 93 (a)
OneToOne
dog
(Canis familiaris)
Mammalia CHEK1 34 33
  • 92.95 (n)
OneToOne
cow
(Bos Taurus)
Mammalia CHEK1 34 33
  • 92.51 (n)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia CHEK1 34
  • 90 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Chek1 16 34 33
  • 89.01 (n)
rat
(Rattus norvegicus)
Mammalia Chek1 33
  • 88.59 (n)
chicken
(Gallus gallus)
Aves STT3A 34 33
  • 69.83 (n)
OneToOne
lizard
(Anolis carolinensis)
Reptilia CHEK1 34
  • 82 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia chek1 33
  • 71.19 (n)
African clawed frog
(Xenopus laevis)
Amphibia LOC398191 33
zebrafish
(Danio rerio)
Actinopterygii chek1 34 33
  • 63.88 (n)
OneToOne
efnb1 33
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.1073 33
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP008118 33
  • 54.67 (n)
fruit fly
(Drosophila melanogaster)
Insecta grp 34 35 33
  • 53.82 (n)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea chk-1 34 33
  • 47.8 (n)
OneToMany
DC2.7b 35
  • 38 (a)
R02C2.2 35
  • 36 (a)
DC2.7a 35
  • 33 (a)
Y43D4A.6 34 35
  • 32 (a)
OneToMany
R02C2.1 34 35
  • 30 (a)
OneToMany
kin-34 34
  • 30 (a)
OneToMany
R02C2.6 34
  • 30 (a)
OneToMany
kin-33 34
  • 18 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes CHK1 36 34 33
  • 45.68 (n)
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0F01276g 33
  • 44.84 (n)
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_AEL185C 33
  • 44.76 (n)
sea squirt
(Ciona savignyi)
Ascidiacea -- 34
  • 52 (a)
OneToOne
Cin.1196 33
bread mold
(Neurospora crassa)
Ascomycetes NCU08346 33
  • 47.47 (n)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes chk1 33
  • 45.82 (n)
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.1196 33
Species where no ortholog for CHEK1 was found in the sources mined by GeneCards:
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for CHEK1 Gene

ENSEMBL:
Gene Tree for CHEK1 (if available)
TreeFam:
Gene Tree for CHEK1 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for CHEK1: view image

Paralogs for CHEK1 Gene

Paralogs for CHEK1 Gene

(73) SIMAP similar genes for CHEK1 Gene using alignment to 10 proteins:

  • CHK1_HUMAN
  • E7EPP6_HUMAN
  • E9PJI4_HUMAN
  • E9PKQ3_HUMAN
  • E9PM65_HUMAN
  • E9PPA5_HUMAN
  • E9PQW7_HUMAN
  • E9PRU7_HUMAN
  • J3KN87_HUMAN
  • Q6W8P8_HUMAN
genes like me logo Genes that share paralogs with CHEK1: view

Variants for CHEK1 Gene

Sequence variations from dbSNP and Humsavar for CHEK1 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs114579795 likely-benign, Hereditary cancer-predisposing syndrome 125,629,059(+) C/T intron_variant
rs139144317 likely-benign, Hereditary cancer-predisposing syndrome 125,654,744(+) T/C intron_variant
rs141004252 likely-benign, Hereditary cancer-predisposing syndrome 125,627,913(+) T/G intron_variant
rs193921098 uncertain-significance, Malignant tumor of prostate 125,676,409(+) G/A/T downstream_transcript_variant
rs756054805 uncertain-significance, Hereditary cancer-predisposing syndrome 125,644,545(+) C/T coding_sequence_variant, non_coding_transcript_variant, stop_gained

Structural Variations from Database of Genomic Variants (DGV) for CHEK1 Gene

Variant ID Type Subtype PubMed ID
esv32964 CNV gain+loss 17666407
nsv474534 CNV novel sequence insertion 20440878

Variation tolerance for CHEK1 Gene

Residual Variation Intolerance Score: 11.6% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.89; 67.55% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for CHEK1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CHEK1

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CHEK1 Gene

Disorders for CHEK1 Gene

MalaCards: The human disease database

(6) MalaCards diseases for CHEK1 Gene - From: DISEASES, Novoseek, and GeneCards

- elite association - COSMIC cancer census association via MalaCards
Search CHEK1 in MalaCards View complete list of genes associated with diseases

Additional Disease Information for CHEK1

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology
genes like me logo Genes that share disorders with CHEK1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for CHEK1 Gene

Publications for CHEK1 Gene

  1. Atm-dependent interactions of a mammalian chk1 homolog with meiotic chromosomes. (PMID: 9382850) Flaggs G … Carr AM (Current biology : CB 1997) 2 3 4 22 58
  2. The F box protein Fbx6 regulates Chk1 stability and cellular sensitivity to replication stress. (PMID: 19716789) Zhang YW … Hunter T (Molecular cell 2009) 3 4 22 58
  3. Chk1 and Claspin potentiate PCNA ubiquitination. (PMID: 18451105) Yang XH … Zou L (Genes & development 2008) 3 4 22 58
  4. Chk1 frameshift mutation in sporadic and hereditary non-polyposis colorectal cancers with microsatellite instability. (PMID: 17408908) Kim CJ … Lee JY (European journal of surgical oncology : the journal of the European Society of Surgical Oncology and the British Association of Surgical Oncology 2007) 3 22 44 58
  5. DNA-dependent phosphorylation of Chk1 and Claspin in a human cell-free system. (PMID: 15707391) Clarke CA … Clarke PR (The Biochemical journal 2005) 3 4 22 58

Products for CHEK1 Gene

  • Addgene plasmids for CHEK1