Aliases for CHCHD4P5 Gene

Aliases for CHCHD4P5 Gene

  • Coiled-Coil-Helix-Coiled-Coil-Helix Domain Containing 4 Pseudogene 5 2 3 5
  • CHCHD4P5 5

External Ids for CHCHD4P5 Gene

Previous GeneCards Identifiers for CHCHD4P5 Gene

  • GC01P246343

Summaries for CHCHD4P5 Gene

GeneCards Summary for CHCHD4P5 Gene

CHCHD4P5 (Coiled-Coil-Helix-Coiled-Coil-Helix Domain Containing 4 Pseudogene 5) is a Pseudogene.

Additional gene information for CHCHD4P5 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CHCHD4P5 Gene

Genomics for CHCHD4P5 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CHCHD4P5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J246178 Enhancer 0.6 Ensembl 600.7 +0.4 423 1.2 GATAD2A RXRB SOX13 NR2F2 SPI1 SMAD4 NFIL3 RXRA RARA SMARCA4 CHCHD4P5 lnc-CNST-4 SMYD3-AS1 RNU6-1283P RF00026-117 SMYD3
GH01J246181 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +3.1 3051 2.1 ZNF512 LEF1 IKZF1 JUND MTA2 PKNOX1 POLR2A MTA1 NR2C1 ZNF24 ZNF670-ZNF695 SMYD3-AS1 ZNF669 AHCTF1 CHCHD4P5 lnc-CNST-4 RNU6-1283P RF00026-117 SMYD3
GH01J246176 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 -2.2 -2216 0.8 HNRNPL GATAD2A TFE3 SOX13 NFKBIZ RCOR2 RXRB IRF2 CEBPA TCF12 CHCHD4P5 lnc-CNST-4 SMYD3-AS1 SMYD3
GH01J246187 Enhancer 1.1 ENCODE dbSUPER 0.4 +9.3 9264 0.7 GATAD2A ZNF512 ZNF7 RXRB IRF2 CEBPA SOX13 MGA GTF2E2 UBTF RF00026-117 RNU6-1283P CHCHD4P5 lnc-CNST-4 SMYD3
GH01J246165 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -12.5 -12472 1.6 CREB1 LEF1 IKZF1 FOXA1 MTA2 PKNOX1 MTA1 NR2C1 ZNF24 DPF2 SMYD3-AS1 CHCHD4P5 lnc-CNST-4 SMYD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CHCHD4P5 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CHCHD4P5 Gene

Genomic Locations for CHCHD4P5 Gene
chr1:246,178,778-246,179,204
(GRCh38/hg38)
Size:
427 bases
Orientation:
Plus strand
chr1:246,342,080-246,342,506
(GRCh37/hg19)
Size:
427 bases
Orientation:
Plus strand

Genomic View for CHCHD4P5 Gene

Genes around CHCHD4P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CHCHD4P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CHCHD4P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CHCHD4P5 Gene

Proteins for CHCHD4P5 Gene

Post-translational modifications for CHCHD4P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CHCHD4P5 Gene

Domains & Families for CHCHD4P5 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CHCHD4P5 Gene

Function for CHCHD4P5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CHCHD4P5 Gene

Localization for CHCHD4P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CHCHD4P5 Gene

Pathways & Interactions for CHCHD4P5 Gene

PathCards logo

SuperPathways for CHCHD4P5 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CHCHD4P5 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CHCHD4P5 Gene

Drugs & Compounds for CHCHD4P5 Gene

No Compound Related Data Available

Transcripts for CHCHD4P5 Gene

mRNA/cDNA for CHCHD4P5 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CHCHD4P5 Gene

No ASD Table

Relevant External Links for CHCHD4P5 Gene

GeneLoc Exon Structure for
CHCHD4P5

Expression for CHCHD4P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CHCHD4P5 Gene

genes like me logo Genes that share expression patterns with CHCHD4P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CHCHD4P5 Gene

Orthologs for CHCHD4P5 Gene

Evolution for CHCHD4P5 Gene

ENSEMBL:
Gene Tree for CHCHD4P5 (if available)
TreeFam:
Gene Tree for CHCHD4P5 (if available)

No data available for Orthologs for CHCHD4P5 Gene

Paralogs for CHCHD4P5 Gene

No data available for Paralogs for CHCHD4P5 Gene

Variants for CHCHD4P5 Gene

Additional Variant Information for CHCHD4P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CHCHD4P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CHCHD4P5 Gene

Disorders for CHCHD4P5 Gene

No disorders were found for CHCHD4P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CHCHD4P5 Gene

Publications for CHCHD4P5 Gene

No publications were found for CHCHD4P5 Gene.

No data available for Mastermind for CHCHD4P5 Gene

Products for CHCHD4P5 Gene

Sources for CHCHD4P5 Gene