Aliases for CHCHD4P2 Gene

Aliases for CHCHD4P2 Gene

  • Coiled-Coil-Helix-Coiled-Coil-Helix Domain Containing 4 Pseudogene 2 2 3 5
  • CHCHD4P2 5

External Ids for CHCHD4P2 Gene

Previous GeneCards Identifiers for CHCHD4P2 Gene

  • GC09M110861

Summaries for CHCHD4P2 Gene

GeneCards Summary for CHCHD4P2 Gene

CHCHD4P2 (Coiled-Coil-Helix-Coiled-Coil-Helix Domain Containing 4 Pseudogene 2) is a Pseudogene.

Additional gene information for CHCHD4P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CHCHD4P2 Gene

Genomics for CHCHD4P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CHCHD4P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J108099 Enhancer 0.9 Ensembl ENCODE 0.7 -2.2 -2239 1.2 NCOR1 IKZF1 ZNF592 NFIC TCF7L2 PRDM10 HLTF HDAC2 ZNF384 TCF12 CHCHD4P2 piR-49672 LOC105376214 lnc-ACTL7B-11 KLF4 ACTL7B
GH09J108108 Enhancer 0.9 Ensembl 0.4 -10.7 -10739 0.6 IKZF1 NCOR1 ZNF592 NFIC REST HES1 MBD2 ARNT NFATC3 TAF9B CHCHD4P2 piR-49672 LOC105376214 KLF4 lnc-ACTL7B-11 ACTL7B
GH09J108110 Enhancer 0.7 Ensembl 0.4 -11.3 -11339 0.2 CEBPA FOXA1 FOXA2 NBN ZNF316 ZFP91 FOXP1 PRDM10 JUND NCOA1 CHCHD4P2 piR-49672 LOC105376214 KLF4 lnc-ACTL7B-11 ACTL7B
GH09J108131 Enhancer 0.9 Ensembl ENCODE 0.3 -32.9 -32939 0.6 JUND ZNF217 MBD2 CTBP1 CUX1 YY1 GATA3 TCF7L2 SMARCE1 FOXA1 piR-49672 CHCHD4P2 HSALNG0073555 LOC105376214 lnc-ACTL7B-11 KLF4 ACTL7B
GH09J108150 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.2 -52.5 -52499 2.9 IKZF1 ZNF592 NFIC RXRA TAL1 JUND PRDM10 SPI1 MAX TCF12 piR-49672 HSALNG0073555 CHCHD4P2 LOC105376214 lnc-ACTL7B-11 KLF4 ACTL7B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CHCHD4P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CHCHD4P2 Gene

Latest Assembly
chr9:108,097,246-108,097,962
(GRCh38/hg38)
Size:
717 bases
Orientation:
Minus strand

Previous Assembly
chr9:110,859,526-110,860,242
(GRCh37/hg19 by Entrez Gene)
Size:
717 bases
Orientation:
Minus strand

chr9:110,859,712-110,860,131
(GRCh37/hg19 by Ensembl)
Size:
420 bases
Orientation:
Minus strand

Genomic View for CHCHD4P2 Gene

Genes around CHCHD4P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CHCHD4P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CHCHD4P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CHCHD4P2 Gene

Proteins for CHCHD4P2 Gene

Post-translational modifications for CHCHD4P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CHCHD4P2 Gene

Domains & Families for CHCHD4P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CHCHD4P2 Gene

Function for CHCHD4P2 Gene

Phenotypes From GWAS Catalog for CHCHD4P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CHCHD4P2 Gene

Localization for CHCHD4P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CHCHD4P2 Gene

Pathways & Interactions for CHCHD4P2 Gene

PathCards logo

SuperPathways for CHCHD4P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CHCHD4P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CHCHD4P2 Gene

Drugs & Compounds for CHCHD4P2 Gene

No Compound Related Data Available

Transcripts for CHCHD4P2 Gene

mRNA/cDNA for CHCHD4P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CHCHD4P2 Gene

No ASD Table

Relevant External Links for CHCHD4P2 Gene

GeneLoc Exon Structure for
CHCHD4P2

Expression for CHCHD4P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CHCHD4P2 Gene

mRNA differential expression in normal tissues according to GTEx for CHCHD4P2 Gene

This gene is overexpressed in Testis (x25.6) and Skin - Sun Exposed (Lower leg) (x5.4).
genes like me logo Genes that share expression patterns with CHCHD4P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CHCHD4P2 Gene

Orthologs for CHCHD4P2 Gene

Evolution for CHCHD4P2 Gene

ENSEMBL:
Gene Tree for CHCHD4P2 (if available)
TreeFam:
Gene Tree for CHCHD4P2 (if available)
Alliance of Genome Resources:
Additional Orthologs for CHCHD4P2

No data available for Orthologs for CHCHD4P2 Gene

Paralogs for CHCHD4P2 Gene

No data available for Paralogs for CHCHD4P2 Gene

Variants for CHCHD4P2 Gene

Additional Variant Information for CHCHD4P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CHCHD4P2
Leiden Open Variation Database (LOVD)
CHCHD4P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CHCHD4P2 Gene

Disorders for CHCHD4P2 Gene

No disorders were found for CHCHD4P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CHCHD4P2 Gene

Publications for CHCHD4P2 Gene

No publications were found for CHCHD4P2 Gene.

No data available for Mastermind for CHCHD4P2 Gene

Products for CHCHD4P2 Gene

Sources for CHCHD4P2 Gene