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Aliases for CHCHD4P2 Gene

Subcategory (RNA class) for CHCHD4P2 Gene

lncRNA

Aliases for CHCHD4P2 Gene

  • Coiled-Coil-Helix-Coiled-Coil-Helix Domain Containing 4 Pseudogene 2 2 3 5

External Ids for CHCHD4P2 Gene

ORGUL Members for CHCHD4P2 Gene

Previous GeneCards Identifiers for CHCHD4P2 Gene

  • GC09M110861

Summaries for CHCHD4P2 Gene

GeneCards Summary for CHCHD4P2 Gene

CHCHD4P2 (Coiled-Coil-Helix-Coiled-Coil-Helix Domain Containing 4 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for CHCHD4P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CHCHD4P2 Gene

Genomics for CHCHD4P2 Gene

GeneHancer (GH) Regulatory Elements for CHCHD4P2 Gene

Promoters and enhancers for CHCHD4P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I108093 Enhancer 1.2 Ensembl ENCODE 0.8 +3.5 3515 2.3 HDGF PKNOX1 SMAD1 ARNT YY1 ZNF766 FOS REST ZNF592 MEF2D CHCHD4P2 LOC105376213 LOC105376214
GH09I108099 Enhancer 0.7 ENCODE 0.8 -2.1 -2083 0.7 HDAC1 ZBTB40 E4F1 FOSL1 TCF12 NCOR1 CBFA2T2 PRDM10 TCF7L2 SOX6 CHCHD4P2 GC09P108154 LOC105376214
GH09I108095 Enhancer 0.5 ENCODE 0.8 +2.1 2148 0.1 ZNF740 NFRKB IKZF1 REST CHCHD4P2 LOC105376213 LOC105376214
GH09I108150 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.2 -53.1 -53113 1.9 PKNOX1 JUN TEAD4 TAL1 MAX CEBPG RAD21 FOSL1 TCF12 CTBP1 GC09P108154 CHCHD4P2 LOC105376214
GH09I108141 Enhancer 0.7 Ensembl ENCODE 0.3 -44.8 -44841 2 CTCF RXRA ZNF585B MAX RAD21 NR2F2 ELP1 GC09P108154 CHCHD4P2 LOC105376214
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CHCHD4P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CHCHD4P2 Gene

Genomic Locations for CHCHD4P2 Gene
chr9:108,097,432-108,097,851
(GRCh38/hg38)
Size:
420 bases
Orientation:
Minus strand
chr9:110,859,536-110,860,131
(GRCh37/hg19)

Genomic View for CHCHD4P2 Gene

Genes around CHCHD4P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CHCHD4P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CHCHD4P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CHCHD4P2 Gene

Proteins for CHCHD4P2 Gene

Post-translational modifications for CHCHD4P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CHCHD4P2 Gene

Domains & Families for CHCHD4P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CHCHD4P2 Gene

Function for CHCHD4P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CHCHD4P2 Gene

Localization for CHCHD4P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CHCHD4P2 Gene

Pathways & Interactions for CHCHD4P2 Gene

SuperPathways for CHCHD4P2 Gene

No Data Available

Interacting Proteins for CHCHD4P2 Gene

Gene Ontology (GO) - Biological Process for CHCHD4P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CHCHD4P2 Gene

Drugs & Compounds for CHCHD4P2 Gene

No Compound Related Data Available

Transcripts for CHCHD4P2 Gene

mRNA/cDNA for CHCHD4P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CHCHD4P2 Gene

No ASD Table

Relevant External Links for CHCHD4P2 Gene

GeneLoc Exon Structure for
CHCHD4P2
ECgene alternative splicing isoforms for
CHCHD4P2

Expression for CHCHD4P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CHCHD4P2 Gene

mRNA differential expression in normal tissues according to GTEx for CHCHD4P2 Gene

This gene is overexpressed in Testis (x25.6) and Skin - Sun Exposed (Lower leg) (x5.4).

NURSA nuclear receptor signaling pathways regulating expression of CHCHD4P2 Gene:

CHCHD4P2
genes like me logo Genes that share expression patterns with CHCHD4P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CHCHD4P2 Gene

Orthologs for CHCHD4P2 Gene

Evolution for CHCHD4P2 Gene

ENSEMBL:
Gene Tree for CHCHD4P2 (if available)
TreeFam:
Gene Tree for CHCHD4P2 (if available)

No data available for Orthologs for CHCHD4P2 Gene

Paralogs for CHCHD4P2 Gene

No data available for Paralogs for CHCHD4P2 Gene

Variants for CHCHD4P2 Gene

Additional Variant Information for CHCHD4P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CHCHD4P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CHCHD4P2 Gene

Disorders for CHCHD4P2 Gene

No disorders were found for CHCHD4P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CHCHD4P2 Gene

Publications for CHCHD4P2 Gene

No publications were found for CHCHD4P2 Gene.

Products for CHCHD4P2 Gene

Sources for CHCHD4P2 Gene

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