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Aliases for CFL1P1 Gene

Aliases for CFL1P1 Gene

  • Cofilin 1 Pseudogene 1 2 3 5
  • Cofilin Pseudogene 1 2 3
  • Cofilin 1 (Non-Muscle) Pseudogene 1 3
  • CFLP1 3

External Ids for CFL1P1 Gene

Previous HGNC Symbols for CFL1P1 Gene

  • CFLP1

Previous GeneCards Identifiers for CFL1P1 Gene

  • GC10P089578

Summaries for CFL1P1 Gene

GeneCards Summary for CFL1P1 Gene

CFL1P1 (Cofilin 1 Pseudogene 1) is a Pseudogene.

Additional gene information for CFL1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CFL1P1 Gene

Genomics for CFL1P1 Gene

GeneHancer (GH) Regulatory Elements for CFL1P1 Gene

Promoters and enhancers for CFL1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I087815 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE 550.8 -0.6 -600 4.4 HDGF PKNOX1 SMAD1 ARID4B SIN3A YY1 SLC30A9 POLR2B ZNF213 ZNF207 ATAD1 CFL1P1 GC10M087815 GC10P087816
GH10I087090 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 20.6 -724.0 -724032 6.2 MLX ZFP64 DMAP1 YY1 ZNF213 ZNF143 SP3 NFYC SSRP1 ZNF610 FAM35A GLUD1 NUTM2A-AS1 ENSG00000272631 WAPL BMPR1A CFL1P1 RPL11P3 ENSG00000227896 BMS1P3
GH10I087585 Enhancer 1 ENCODE 32 -231.5 -231548 2.6 PKNOX1 SMAD1 FEZF1 YY1 FOS ZNF214 KLF13 YY2 REST ZNF662 ENSG00000272631 CFL1P1 NUTM2A LINC00863 FAM35A ATAD1 BMPR1A BMS1P3 NUTM2A-AS1 GC10P087578
GH10I087213 Enhancer 0.8 Ensembl ENCODE 10.8 -603.7 -603661 1.3 CTCF CEBPB ZNF384 CEBPG RAD21 ZNF157 CEBPA SMC3 PIR40860 CFL1P1 NUTM2A-AS1 NUTM2A
GH10I087840 Enhancer 1.5 FANTOM5 Ensembl ENCODE 0.3 +26.0 25974 6.8 FOXA2 ARNT SIN3A FEZF1 ZNF2 ZNF213 FOS KLF13 SP3 JUNB GC10P087843 FAM35A NUTM2A-AS1 RPL11P3 NUTM2A ENSG00000261011 ENSG00000224745 LIPJ ATAD1 GC10P087845
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CFL1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CFL1P1 Gene

Genomic Locations for CFL1P1 Gene
chr10:87,817,928-87,845,612
(GRCh38/hg38)
Size:
27,685 bases
Orientation:
Plus strand
chr10:89,577,685-89,605,369
(GRCh37/hg19)

Genomic View for CFL1P1 Gene

Genes around CFL1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CFL1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CFL1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CFL1P1 Gene

Proteins for CFL1P1 Gene

Post-translational modifications for CFL1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CFL1P1 Gene

Domains & Families for CFL1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CFL1P1 Gene

Function for CFL1P1 Gene

Phenotypes From GWAS Catalog for CFL1P1 Gene

Phenotypes for CFL1P1 Gene

GenomeRNAi human phenotypes for CFL1P1:
genes like me logo Genes that share phenotypes with CFL1P1: view

Animal Model Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CFL1P1 Gene

Localization for CFL1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CFL1P1 Gene

Pathways & Interactions for CFL1P1 Gene

SuperPathways for CFL1P1 Gene

No Data Available

Interacting Proteins for CFL1P1 Gene

Gene Ontology (GO) - Biological Process for CFL1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CFL1P1 Gene

Drugs & Compounds for CFL1P1 Gene

No Compound Related Data Available

Transcripts for CFL1P1 Gene

mRNA/cDNA for CFL1P1 Gene

(2) Additional mRNA sequences :
(7) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CFL1P1 Gene

Cofilin 1 (non-muscle) pseudogene 1:
Representative Sequences:

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for CFL1P1 Gene

No ASD Table

Relevant External Links for CFL1P1 Gene

GeneLoc Exon Structure for
CFL1P1
ECgene alternative splicing isoforms for
CFL1P1

Expression for CFL1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CFL1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of CFL1P1 Gene:

CFL1P1

SOURCE GeneReport for Unigene cluster for CFL1P1 Gene:

Hs.369431
genes like me logo Genes that share expression patterns with CFL1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CFL1P1 Gene

Orthologs for CFL1P1 Gene

Evolution for CFL1P1 Gene

ENSEMBL:
Gene Tree for CFL1P1 (if available)
TreeFam:
Gene Tree for CFL1P1 (if available)

No data available for Orthologs for CFL1P1 Gene

Paralogs for CFL1P1 Gene

No data available for Paralogs for CFL1P1 Gene

Variants for CFL1P1 Gene

Sequence variations from dbSNP and Humsavar for CFL1P1 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000056315 -- 87,832,529(+) G/C intron_variant
rs1000091820 -- 87,840,086(+) T/G intron_variant
rs1000314013 -- 87,832,286(+) T/C/G intron_variant
rs1000386939 -- 87,818,905(+) G/A non_coding_transcript_variant
rs1000422465 -- 87,825,599(+) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for CFL1P1 Gene

Variant ID Type Subtype PubMed ID
nsv518233 CNV loss 19592680
nsv24540 CNV insertion 16902084
nsv1041462 CNV gain 25217958

Additional Variant Information for CFL1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CFL1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CFL1P1 Gene

Disorders for CFL1P1 Gene

Additional Disease Information for CFL1P1

No disorders were found for CFL1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CFL1P1 Gene

Publications for CFL1P1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 58

Products for CFL1P1 Gene

Sources for CFL1P1 Gene

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