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Aliases for CFAP97D2 Gene

Aliases for CFAP97D2 Gene

  • CFAP97 Domain Containing 2 2 3 5
  • Uncharacterized Protein C17orf105 Homolog 3

External Ids for CFAP97D2 Gene

Previous GeneCards Identifiers for CFAP97D2 Gene

  • GC13P114172

Summaries for CFAP97D2 Gene

GeneCards Summary for CFAP97D2 Gene

CFAP97D2 (CFAP97 Domain Containing 2) is a Protein Coding gene.

Additional gene information for CFAP97D2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CFAP97D2 Gene

Genomics for CFAP97D2 Gene

GeneHancer (GH) Regulatory Elements for CFAP97D2 Gene

Promoters and enhancers for CFAP97D2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J114155 Enhancer 1.1 Ensembl ENCODE dbSUPER 650.7 -0.3 -328 1 HDGF HDAC1 BCOR ZNF146 ZBTB6 EBF1 YBX1 GLI4 ZNF48 ZNF514 CFAP97D2 CDC16 PCID2 CHAMP1 RASA3
GH13J114153 Enhancer 0.6 ENCODE dbSUPER 650.7 -1.5 -1450 0.2 MAX MYC CFAP97D2 RASA3
GH13J114154 Enhancer 0.6 ENCODE dbSUPER 650.7 -1.6 -1610 0.2 MAX MYC CFAP97D2 RASA3
GH13J114151 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.7 -2.6 -2586 1 CTCF STAT1 SMARCC1 RFX1 NFIA RXRA CEBPB CEBPG PPARG GABPA CDC16 CFAP97D2 RASA3
GH13J114152 Enhancer 1 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -3.5 -3494 0.4 HLF RASA3 CFAP97D2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CFAP97D2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CFAP97D2 Gene

Genomic Locations for CFAP97D2 Gene
chr13:114,154,691-114,223,084
(GRCh38/hg38)
Size:
68,394 bases
Orientation:
Plus strand

Genomic View for CFAP97D2 Gene

Genes around CFAP97D2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CFAP97D2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CFAP97D2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CFAP97D2 Gene

Proteins for CFAP97D2 Gene

  • Protein details for CFAP97D2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1B0GV50-A0A1B0GV50_HUMAN
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A1B0GV50

    Protein attributes for CFAP97D2 Gene

    Size:
    99 amino acids
    Molecular mass:
    11768 Da
    Quaternary structure:
    No Data Available
  • Protein details for CFAP97D2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1B0GU71-A0A1B0GU71_HUMAN
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A1B0GU71

    Protein attributes for CFAP97D2 Gene

    Size:
    98 amino acids
    Molecular mass:
    11681 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CFAP97D2 Gene

Post-translational modifications for CFAP97D2 Gene

No Post-translational modifications

Other Protein References for CFAP97D2 Gene

No data available for DME Specific Peptides for CFAP97D2 Gene

Domains & Families for CFAP97D2 Gene

Protein Domains for CFAP97D2 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CFAP97D2: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CFAP97D2 Gene

Function for CFAP97D2 Gene

Phenotypes From GWAS Catalog for CFAP97D2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CFAP97D2 Gene

Localization for CFAP97D2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CFAP97D2 Gene

Pathways & Interactions for CFAP97D2 Gene

SuperPathways for CFAP97D2 Gene

No Data Available

Interacting Proteins for CFAP97D2 Gene

Gene Ontology (GO) - Biological Process for CFAP97D2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CFAP97D2 Gene

Drugs & Compounds for CFAP97D2 Gene

No Compound Related Data Available

Transcripts for CFAP97D2 Gene

mRNA/cDNA for CFAP97D2 Gene

(1) REFSEQ mRNAs :
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CFAP97D2 Gene

No ASD Table

Relevant External Links for CFAP97D2 Gene

GeneLoc Exon Structure for
CFAP97D2
ECgene alternative splicing isoforms for
CFAP97D2

Expression for CFAP97D2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CFAP97D2 Gene

Orthologs for CFAP97D2 Gene

This gene was present in the common ancestor of mammals.

Orthologs for CFAP97D2 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia LOC100848072 33
  • 74.53 (n)
Species where no ortholog for CFAP97D2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for CFAP97D2 Gene

ENSEMBL:
Gene Tree for CFAP97D2 (if available)
TreeFam:
Gene Tree for CFAP97D2 (if available)

Paralogs for CFAP97D2 Gene

No data available for Paralogs for CFAP97D2 Gene

Variants for CFAP97D2 Gene

Sequence variations from dbSNP and Humsavar for CFAP97D2 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000116536 -- 114,216,406(+) C/T intron_variant
rs1000153053 -- 114,175,642(+) C/T 5_prime_UTR_variant
rs1000261961 -- 114,190,123(+) C/G intron_variant
rs1000300328 -- 114,210,025(+) A/G intron_variant
rs1000303385 -- 114,204,030(+) G/C intron_variant

Additional Variant Information for CFAP97D2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CFAP97D2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CFAP97D2 Gene

Disorders for CFAP97D2 Gene

No disorders were found for CFAP97D2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CFAP97D2 Gene

Publications for CFAP97D2 Gene

No publications were found for CFAP97D2 Gene.

Products for CFAP97D2 Gene

Sources for CFAP97D2 Gene

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