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Aliases for CERS3-AS1 Gene

Subcategory (RNA class) for CERS3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CERS3-AS1 Gene

  • CERS3 Antisense RNA 1 2 3 5

External Ids for CERS3-AS1 Gene

Summaries for CERS3-AS1 Gene

GeneCards Summary for CERS3-AS1 Gene

CERS3-AS1 (CERS3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CERS3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CERS3-AS1 Gene

Genomics for CERS3-AS1 Gene

GeneHancer (GH) Regulatory Elements for CERS3-AS1 Gene

Promoters and enhancers for CERS3-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I100374 Enhancer 0.3 FANTOM5 550.8 +1.3 1261 0.2 EZH2 CERS3-AS1 ADAMTS17 CERS3
GH15I099563 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 18.9 -806.5 -806482 5.5 CLOCK MLX FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 MEF2A ENSG00000259921 HSP90B2P CERS3-AS1 TTC23 LYSMD4 ENSG00000201724 GC15M099683
GH15I101293 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE 14 +922.4 922415 4.7 PKNOX1 SMAD1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B POLR2B SNRPA1 ENSG00000259172 LINS1 LOC100419174 CERS3-AS1 PRKXP1 RNU6-807P WASH3P LRRK1 ENSG00000270127
GH15I100939 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 14 +568.1 568123 2.3 HDGF PKNOX1 SMAD1 RB1 ZSCAN4 BACH1 NEUROD1 EBF1 YBX1 POLR2A LRRK1 CERS3-AS1 LOC100419174 LINS1 CHSY1 LOC101927751 PIR34573
GH15I101254 Enhancer 1.2 Ensembl ENCODE 12.4 +882.7 882721 2 PKNOX1 ATF1 FOXA2 ARNT ARID4B FEZF1 TCF12 CBX5 GATA2 ARID2 LINS1 CERS3-AS1 SNRPA1 LRRK1 LOC100419174 LOC100128108 ASB7 CHSY1 PIR39927 GC15M101273
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CERS3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CERS3-AS1 Gene

Genomic Locations for CERS3-AS1 Gene
chr15:100,372,939-100,437,914
(GRCh38/hg38)
Size:
64,976 bases
Orientation:
Plus strand
chr15:100,913,144-100,978,119
(GRCh37/hg19)

Genomic View for CERS3-AS1 Gene

Genes around CERS3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CERS3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CERS3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CERS3-AS1 Gene

Proteins for CERS3-AS1 Gene

Post-translational modifications for CERS3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CERS3-AS1 Gene

Domains & Families for CERS3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CERS3-AS1 Gene

Function for CERS3-AS1 Gene

Phenotypes From GWAS Catalog for CERS3-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CERS3-AS1 Gene

Localization for CERS3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CERS3-AS1 Gene

Pathways & Interactions for CERS3-AS1 Gene

SuperPathways for CERS3-AS1 Gene

No Data Available

Interacting Proteins for CERS3-AS1 Gene

Gene Ontology (GO) - Biological Process for CERS3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CERS3-AS1 Gene

Drugs & Compounds for CERS3-AS1 Gene

No Compound Related Data Available

Transcripts for CERS3-AS1 Gene

mRNA/cDNA for CERS3-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CERS3-AS1 Gene

No ASD Table

Relevant External Links for CERS3-AS1 Gene

GeneLoc Exon Structure for
CERS3-AS1
ECgene alternative splicing isoforms for
CERS3-AS1

Expression for CERS3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CERS3-AS1 Gene

genes like me logo Genes that share expression patterns with CERS3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CERS3-AS1 Gene

Orthologs for CERS3-AS1 Gene

Evolution for CERS3-AS1 Gene

ENSEMBL:
Gene Tree for CERS3-AS1 (if available)
TreeFam:
Gene Tree for CERS3-AS1 (if available)

No data available for Orthologs for CERS3-AS1 Gene

Paralogs for CERS3-AS1 Gene

No data available for Paralogs for CERS3-AS1 Gene

Variants for CERS3-AS1 Gene

Sequence variations from dbSNP and Humsavar for CERS3-AS1 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000038683 -- 100,372,966(+) G/C non_coding_transcript_variant
rs1000109412 -- 100,401,970(+) T/C intron_variant
rs1000180191 -- 100,394,444(+) T/A intron_variant
rs1000191670 -- 100,406,269(+) A/T intron_variant
rs1000201482 -- 100,405,965(+) G/A intron_variant

Additional Variant Information for CERS3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CERS3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CERS3-AS1 Gene

Disorders for CERS3-AS1 Gene

Additional Disease Information for CERS3-AS1

No disorders were found for CERS3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CERS3-AS1 Gene

Publications for CERS3-AS1 Gene

No publications were found for CERS3-AS1 Gene.

Products for CERS3-AS1 Gene

Sources for CERS3-AS1 Gene

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