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Aliases for CENPUP2 Gene

Subcategory (RNA class) for CENPUP2 Gene

antisense

Aliases for CENPUP2 Gene

  • Centromere Protein U Pseudogene 2 2 3 5
  • MLF1 Interacting Protein Pseudogene 3

External Ids for CENPUP2 Gene

ORGUL Members for CENPUP2 Gene

Previous GeneCards Identifiers for CENPUP2 Gene

  • GC12M025246

Summaries for CENPUP2 Gene

GeneCards Summary for CENPUP2 Gene

CENPUP2 (Centromere Protein U Pseudogene 2) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for CENPUP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CENPUP2 Gene

Genomics for CENPUP2 Gene

GeneHancer (GH) Regulatory Elements for CENPUP2 Gene

Promoters and enhancers for CENPUP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J025092 Enhancer 0.4 FANTOM5 dbSUPER 650.7 +1.1 1129 0.3 CENPUP2 KRAS LRMP C12orf77
GH12J025106 Enhancer 0.7 dbSUPER 4.9 -14.2 -14225 2.8 PKNOX1 BACH1 BMI1 BATF IRF4 RELA EED ATF7 BCLAF1 IKZF2 KRAS CENPUP2 ENSG00000276842 GC12P025123 GC12M025108 CASC1 LRMP
GH12J025067 Enhancer 0.6 dbSUPER 5.6 +21.5 21495 8.8 ZSCAN4 JUNB STAT5A MEF2B BATF ATF2 IRF4 ZNF664 ZNF217 TARDBP LRMP CENPUP2 C12orf77
GH12J025050 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +40.0 39982 6.6 HDGF ATF1 PKNOX1 SMAD1 STAT5A ZBTB40 BATF KLF5 IRF4 YY1 LRMP CASC1 ETFRF1 C12orf77 KRAS CENPUP2 LOC645177
GH12J025057 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 0.3 +35.1 35104 1.6 JUNB STAT5A EBF1 BATF IRF4 JUND POLR2A BCL11A EED NFATC1 LRMP C12orf77 CASC1 CENPUP2 LOC645177
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CENPUP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CENPUP2 Gene

Genomic Locations for CENPUP2 Gene
chr12:25,092,666-25,093,900
(GRCh38/hg38)
Size:
1,235 bases
Orientation:
Minus strand
chr12:25,245,600-25,246,834
(GRCh37/hg19)
Size:
1,235 bases
Orientation:
Minus strand

Genomic View for CENPUP2 Gene

Genes around CENPUP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CENPUP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CENPUP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CENPUP2 Gene

Function for CENPUP2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CENPUP2 Gene

Localization for CENPUP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CENPUP2 Gene

Pathways & Interactions for CENPUP2 Gene

SuperPathways for CENPUP2 Gene

No Data Available

Interacting Proteins for CENPUP2 Gene

Gene Ontology (GO) - Biological Process for CENPUP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CENPUP2 Gene

Drugs & Compounds for CENPUP2 Gene

No Compound Related Data Available

Transcripts for CENPUP2 Gene

mRNA/cDNA for CENPUP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CENPUP2 Gene

No ASD Table

Relevant External Links for CENPUP2 Gene

GeneLoc Exon Structure for
CENPUP2
ECgene alternative splicing isoforms for
CENPUP2

Expression for CENPUP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CENPUP2 Gene

mRNA differential expression in normal tissues according to GTEx for CENPUP2 Gene

This gene is overexpressed in Whole Blood (x5.1).

NURSA nuclear receptor signaling pathways regulating expression of CENPUP2 Gene:

CENPUP2
genes like me logo Genes that share expression patterns with CENPUP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CENPUP2 Gene

Orthologs for CENPUP2 Gene

Evolution for CENPUP2 Gene

ENSEMBL:
Gene Tree for CENPUP2 (if available)
TreeFam:
Gene Tree for CENPUP2 (if available)

No data available for Orthologs for CENPUP2 Gene

Paralogs for CENPUP2 Gene

No data available for Paralogs for CENPUP2 Gene

Variants for CENPUP2 Gene

Additional Variant Information for CENPUP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CENPUP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CENPUP2 Gene

Disorders for CENPUP2 Gene

No disorders were found for CENPUP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CENPUP2 Gene

Publications for CENPUP2 Gene

No publications were found for CENPUP2 Gene.

Products for CENPUP2 Gene

Sources for CENPUP2 Gene

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