Aliases for CENPUP2 Gene

Aliases for CENPUP2 Gene

  • Centromere Protein U Pseudogene 2 2 3 5
  • MLF1 Interacting Protein Pseudogene 3
  • CENPUP2 5

External Ids for CENPUP2 Gene

Previous GeneCards Identifiers for CENPUP2 Gene

  • GC12M025246

Summaries for CENPUP2 Gene

GeneCards Summary for CENPUP2 Gene

CENPUP2 (Centromere Protein U Pseudogene 2) is a Pseudogene.

Additional gene information for CENPUP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CENPUP2 Gene

Genomics for CENPUP2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CENPUP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J025092 Enhancer 0.4 FANTOM5 dbSUPER 600.7 +1.1 1129 0.3 CENPUP2 lnc-CASC1-2 KRAS IRAG2 NONHSAG010702.2 C12orf77 CFAP94
GH12J025070 Enhancer 0.8 Ensembl dbSUPER 5.6 +20.7 20699 5.2 ZSCAN4 ARID3A RUNX3 JUNB SPI1 IRF4 BATF TBL1XR1 STAT5A ATF2 IRAG2 CENPUP2 NONHSAG010702.2 piR-61945-093 C12orf77 CFAP94
GH12J025099 Enhancer 0.7 Ensembl dbSUPER 0.4 -6.8 -6800 1.4 BACH1 NFE2 ZNF316 MAFF MAFK MAFG NFE2L2 SPI1 EMSY POLR2A ENSG00000258449 KRAS CFAP94 CENPUP2 lnc-CASC1-2 C12orf77 IRAG2
GH12J025098 Enhancer 0.3 Ensembl dbSUPER 0.7 -4.3 -4301 0.4 KRAS CENPUP2 ENSG00000258449 lnc-CASC1-2 C12orf77 IRAG2 CFAP94
GH12J025085 Enhancer 0.3 Ensembl dbSUPER 0.7 +4.1 4100 0.8 CFAP94 KRAS CENPUP2 lnc-CASC1-2 NONHSAG010702.2 C12orf77 IRAG2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CENPUP2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CENPUP2 Gene

Genomic Locations for CENPUP2 Gene
chr12:25,092,582-25,093,900
(GRCh38/hg38)
Size:
1,319 bases
Orientation:
Minus strand
chr12:25,245,600-25,246,834
(GRCh37/hg19)
Size:
1,235 bases
Orientation:
Minus strand

Genomic View for CENPUP2 Gene

Genes around CENPUP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CENPUP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CENPUP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CENPUP2 Gene

Proteins for CENPUP2 Gene

Post-translational modifications for CENPUP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CENPUP2 Gene

Domains & Families for CENPUP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CENPUP2 Gene

Function for CENPUP2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CENPUP2 Gene

Localization for CENPUP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CENPUP2 Gene

Pathways & Interactions for CENPUP2 Gene

PathCards logo

SuperPathways for CENPUP2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CENPUP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CENPUP2 Gene

Drugs & Compounds for CENPUP2 Gene

No Compound Related Data Available

Transcripts for CENPUP2 Gene

mRNA/cDNA for CENPUP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CENPUP2 Gene

No ASD Table

Relevant External Links for CENPUP2 Gene

GeneLoc Exon Structure for
CENPUP2

Expression for CENPUP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CENPUP2 Gene

mRNA differential expression in normal tissues according to GTEx for CENPUP2 Gene

This gene is overexpressed in Whole Blood (x5.1).
genes like me logo Genes that share expression patterns with CENPUP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CENPUP2 Gene

Orthologs for CENPUP2 Gene

Evolution for CENPUP2 Gene

ENSEMBL:
Gene Tree for CENPUP2 (if available)
TreeFam:
Gene Tree for CENPUP2 (if available)

No data available for Orthologs for CENPUP2 Gene

Paralogs for CENPUP2 Gene

No data available for Paralogs for CENPUP2 Gene

Variants for CENPUP2 Gene

Additional Variant Information for CENPUP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CENPUP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CENPUP2 Gene

Disorders for CENPUP2 Gene

No disorders were found for CENPUP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CENPUP2 Gene

Publications for CENPUP2 Gene

No publications were found for CENPUP2 Gene.

No data available for Mastermind for CENPUP2 Gene

Products for CENPUP2 Gene

Sources for CENPUP2 Gene