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Aliases for CENPUP1 Gene

Aliases for CENPUP1 Gene

  • Centromere Protein U Pseudogene 1 2 3 5

External Ids for CENPUP1 Gene

Summaries for CENPUP1 Gene

GeneCards Summary for CENPUP1 Gene

CENPUP1 (Centromere Protein U Pseudogene 1) is a Pseudogene.

Additional gene information for CENPUP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CENPUP1 Gene

Genomics for CENPUP1 Gene

GeneHancer (GH) Regulatory Elements for CENPUP1 Gene

Promoters and enhancers for CENPUP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I013717 Enhancer 0.7 ENCODE dbSUPER 0.3 -38.5 -38458 0.2 FOSL1 GATA3 JUND JUN FOS ZBTB40 FAR1 FAR1-IT1 GC11M013687 ENSG00000200685 CENPUP1
GH11I013697 Enhancer 1 ENCODE dbSUPER 0.2 -57.8 -57781 0.6 HDAC1 ARNT TCF12 CREM ZBTB11 NCOA1 ZEB2 NFIC KLF16 SMARCA4 FAR1-IT1 FAR1 GC11M013687 ENSG00000200685 CENPUP1
GH11I013692 Enhancer 0.6 ENCODE dbSUPER 0.2 -63.6 -63638 0.2 SMARCE1 ZNF140 FOXA1 ENSG00000200685 GC11M013687 FAR1 CENPUP1
GH11I013704 Enhancer 0.4 dbSUPER 0.2 -50.7 -50744 1.7 ZNF585B CEBPB ATF7 FAR1-IT1 FAR1 GC11M013687 ENSG00000200685 CENPUP1
GH11I013688 Enhancer 0.2 dbSUPER 0.2 -66.8 -66817 2.1 GC11M013687 ENSG00000200685 FAR1 CENPUP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CENPUP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CENPUP1 Gene

Genomic Locations for CENPUP1 Gene
chr11:13,756,027-13,757,564
(GRCh38/hg38)
Size:
1,538 bases
Orientation:
Plus strand
chr11:13,777,574-13,779,111
(GRCh37/hg19)

Genomic View for CENPUP1 Gene

Genes around CENPUP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CENPUP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CENPUP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CENPUP1 Gene

Proteins for CENPUP1 Gene

Post-translational modifications for CENPUP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CENPUP1 Gene

Domains & Families for CENPUP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CENPUP1 Gene

Function for CENPUP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CENPUP1 Gene

Localization for CENPUP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CENPUP1 Gene

Pathways & Interactions for CENPUP1 Gene

SuperPathways for CENPUP1 Gene

No Data Available

Interacting Proteins for CENPUP1 Gene

Gene Ontology (GO) - Biological Process for CENPUP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CENPUP1 Gene

Drugs & Compounds for CENPUP1 Gene

No Compound Related Data Available

Transcripts for CENPUP1 Gene

mRNA/cDNA for CENPUP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CENPUP1 Gene

No ASD Table

Relevant External Links for CENPUP1 Gene

GeneLoc Exon Structure for
CENPUP1
ECgene alternative splicing isoforms for
CENPUP1

Expression for CENPUP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CENPUP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of CENPUP1 Gene:

CENPUP1
genes like me logo Genes that share expression patterns with CENPUP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CENPUP1 Gene

Orthologs for CENPUP1 Gene

Evolution for CENPUP1 Gene

ENSEMBL:
Gene Tree for CENPUP1 (if available)
TreeFam:
Gene Tree for CENPUP1 (if available)

No data available for Orthologs for CENPUP1 Gene

Paralogs for CENPUP1 Gene

No data available for Paralogs for CENPUP1 Gene

Variants for CENPUP1 Gene

Additional Variant Information for CENPUP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CENPUP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CENPUP1 Gene

Disorders for CENPUP1 Gene

No disorders were found for CENPUP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CENPUP1 Gene

Publications for CENPUP1 Gene

No publications were found for CENPUP1 Gene.

Products for CENPUP1 Gene

Sources for CENPUP1 Gene

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