Aliases for CENPN-AS1 Gene

Data sources for CENPN-AS1 Gene:

Subcategory (RNA class) for CENPN-AS1 Gene

lncRNA

Aliases for CENPN-AS1 Gene

External Ids for CENPN-AS1 Gene

Summaries for CENPN-AS1 Gene

GeneCards Summary for CENPN-AS1 Gene

CENPN-AS1 (CENPN Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for CENPN-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CENPN-AS1 Gene

Genomics for CENPN-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CENPN-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CENPN-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CENPN-AS1 Gene

Latest Assembly
chr16:81,016,791-81,038,747
(GRCh38/hg38)
Size:
21,957 bases
Orientation:
Minus strand

Previous Assembly
chr16:81,050,397-81,069,364
(GRCh37/hg19 by Ensembl)
Size:
18,968 bases
Orientation:
Minus strand

Genomic View for CENPN-AS1 Gene

Genes around CENPN-AS1 on UCSC Golden Path with GeneCards custom track
CENPN-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
CENPN-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CENPN-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CENPN-AS1 Gene

Proteins for CENPN-AS1 Gene

Post-translational modifications for CENPN-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CENPN-AS1 Gene

Domains & Families for CENPN-AS1 Gene

Gene Families for CENPN-AS1 Gene

genes like me logo Genes that share domains with CENPN-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CENPN-AS1 Gene

Function for CENPN-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CENPN-AS1 Gene

Localization for CENPN-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CENPN-AS1 Gene

Pathways & Interactions for CENPN-AS1 Gene

PathCards logo

SuperPathways for CENPN-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CENPN-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CENPN-AS1 Gene

Drugs & Compounds for CENPN-AS1 Gene

No Compound Related Data Available

Transcripts for CENPN-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for CENPN-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000119BF2_9606 lncRNA 792 3

Ensembl: ENST00000561808 (view in UCSC) ,

LNCipedia: lnc-CMC2-1:7,

NONCODE: NONHSAT143929.2,

URS00004E3DA2_9606 lncRNA 560 3

Ensembl: ENST00000566390 (view in UCSC) ,

LNCipedia: lnc-CMC2-1:1,

NONCODE: NONHSAT143928.2,

URS00004F7334_9606 lncRNA 491 3

Ensembl: ENST00000562315 (view in UCSC) ,

LNCipedia: lnc-CMC2-1:9,

NONCODE: NONHSAT143926.2,

URS0000DBB156_9606 lncRNA 2535 1

Ensembl: ENST00000649061 (view in UCSC) ,

URS0000D6E03B_9606 lncRNA 1192 2

LncBook: HSALNT0234205,

LNCipedia: lnc-CMC2-1:3,

CENPN-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for CENPN-AS1 Gene

No ASD Table

Relevant External Links for CENPN-AS1 Gene

GeneLoc Exon Structure for
CENPN-AS1

No data available for mRNA/cDNA for CENPN-AS1 Gene

Expression for CENPN-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CENPN-AS1 Gene

Orthologs for CENPN-AS1 Gene

Evolution for CENPN-AS1 Gene

ENSEMBL:
Gene Tree for CENPN-AS1 (if available)
TreeFam:
Gene Tree for CENPN-AS1 (if available)

No data available for Orthologs for CENPN-AS1 Gene

Paralogs for CENPN-AS1 Gene

No data available for Paralogs for CENPN-AS1 Gene

Variants for CENPN-AS1 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for CENPN-AS1 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for CENPN-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CENPN-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CENPN-AS1 Gene

Disorders for CENPN-AS1 Gene

No disorders were found for CENPN-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CENPN-AS1 Gene

Publications for CENPN-AS1 Gene

No publications were found for CENPN-AS1 Gene.

No data available for Mastermind for CENPN-AS1 Gene

Products for CENPN-AS1 Gene

Sources for CENPN-AS1 Gene