Aliases for CENPCP1 Gene

Aliases for CENPCP1 Gene

  • Centromere Protein C Pseudogene 1 2 3 5
  • Centromere Protein C2, 140kDa Pseudogene 2 3
  • Centromere Protein C 1 Pseudogene 1 2 3
  • Centromere Protein C2, 140kDa 2
  • CENPC1P1 3
  • CENPCP1 5
  • CENPC2 3
  • CENPC 3

External Ids for CENPCP1 Gene

Previous HGNC Symbols for CENPCP1 Gene

  • CENPC
  • CENPC2
  • CENPC1P1

Previous GeneCards Identifiers for CENPCP1 Gene

  • GC12P089896

Summaries for CENPCP1 Gene

GeneCards Summary for CENPCP1 Gene

CENPCP1 (Centromere Protein C Pseudogene 1) is a Pseudogene.

Additional gene information for CENPCP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CENPCP1 Gene

Genomics for CENPCP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CENPCP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J089499 Enhancer 0.2 dbSUPER 600.7 0.0 -10 0.6 CENPCP1 GALNT4 ENSG00000258302 POC1B lnc-GALNT4-1 HSALNG0092948 DUSP6
GH12J089492 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -5.7 -5720 3.6 GATAD2A SP1 PBX2 SOX13 NFE2 FOXK2 ZNF316 MAFG SAP130 TAL1 GALNT4 ENSG00000258302 POC1B CENPCP1 lnc-GALNT4-1 HSALNG0092948 DUSP6
GH12J089496 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.7 -2.3 -2251 3.3 BHLHE40 HLF GALNT4 ENSG00000258302 POC1B CENPCP1 lnc-GALNT4-1 HSALNG0092948 DUSP6
GH12J089450 Enhancer 1.2 FANTOM5 ENCODE CraniofacialAtlas 0.3 -47.2 -47212 5.3 TEAD4 POLR2A SP1 CEBPA ZNF561 ZBTB20 ZXDB CEBPB ZNF316 OSR2 GALNT4 ENSG00000258302 DUSP6 POC1B HSALNG0092948 CENPCP1 lnc-GALNT4-1
GH12J089467 Enhancer 0.9 Ensembl ENCODE 0.3 -31.1 -31142 5.6 GATAD2A CTCF REST RAD21 IKZF2 TRIM22 EED RELB JUND ZXDB GALNT4 ENSG00000258302 POC1B DUSP6 CENPCP1 HSALNG0092948 lnc-GALNT4-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CENPCP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CENPCP1 Gene

Genomic Locations for CENPCP1 Gene
chr12:89,499,942-89,503,082
(GRCh38/hg38)
Size:
3,141 bases
Orientation:
Plus strand
chr12:89,893,685-89,896,859
(GRCh37/hg19)
Size:
3,175 bases
Orientation:
Plus strand

Genomic View for CENPCP1 Gene

Genes around CENPCP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CENPCP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CENPCP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CENPCP1 Gene

Proteins for CENPCP1 Gene

Post-translational modifications for CENPCP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CENPCP1 Gene

Domains & Families for CENPCP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CENPCP1 Gene

Function for CENPCP1 Gene

Phenotypes From GWAS Catalog for CENPCP1 Gene

Animal Model Products

CRISPR Products

miRNA for CENPCP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for CENPCP1 Gene

Localization for CENPCP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CENPCP1 Gene

Pathways & Interactions for CENPCP1 Gene

PathCards logo

SuperPathways for CENPCP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CENPCP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CENPCP1 Gene

Drugs & Compounds for CENPCP1 Gene

No Compound Related Data Available

Transcripts for CENPCP1 Gene

mRNA/cDNA for CENPCP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CENPCP1 Gene

No ASD Table

Relevant External Links for CENPCP1 Gene

GeneLoc Exon Structure for
CENPCP1

Expression for CENPCP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CENPCP1 Gene

genes like me logo Genes that share expression patterns with CENPCP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CENPCP1 Gene

Orthologs for CENPCP1 Gene

Evolution for CENPCP1 Gene

ENSEMBL:
Gene Tree for CENPCP1 (if available)
TreeFam:
Gene Tree for CENPCP1 (if available)

No data available for Orthologs for CENPCP1 Gene

Paralogs for CENPCP1 Gene

No data available for Paralogs for CENPCP1 Gene

Variants for CENPCP1 Gene

Additional Variant Information for CENPCP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CENPCP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CENPCP1 Gene

Disorders for CENPCP1 Gene

No disorders were found for CENPCP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CENPCP1 Gene

Publications for CENPCP1 Gene

  1. In vivo functional dissection of human inner kinetochore protein CENP-C. (PMID: 12490152) Trazzi S … Della Valle G (Journal of structural biology 2002) 3 23
  2. Sequence homologies and linkage group conservation of the human and mouse Cenpc genes. (PMID: 7959789) McKay S … Cooke H (Genomics 1994) 2 3
  3. Mapping of the human CENP-B gene to chromosome 20 and the CENP-C gene to chromosome 12 by a rapid cycle DNA amplification procedure. (PMID: 8406460) Sugimoto K … Himeno M (Genomics 1993) 2 3
  4. The C-terminal domain of CENP-C displays multiple and critical functions for mammalian centromere formation. (PMID: 19503796) Trazzi S … Della Valle G (PloS one 2009) 23
  5. Mapping the assembly pathways that specify formation of the trilaminar kinetochore plates in human cells. (PMID: 17030981) Liu ST … Yen TJ (The Journal of cell biology 2006) 23

Products for CENPCP1 Gene

Sources for CENPCP1 Gene