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Aliases for CENPCP1 Gene

Aliases for CENPCP1 Gene

  • Centromere Protein C Pseudogene 1 2 3 5
  • Centromere Protein C2, 140kDa Pseudogene 2 3
  • Centromere Protein C 1 Pseudogene 1 2 3
  • Centromere Protein C2, 140kDa 2
  • CENPC1P1 3
  • CENPC2 3
  • CENPC 3

External Ids for CENPCP1 Gene

Previous HGNC Symbols for CENPCP1 Gene

  • CENPC
  • CENPC2
  • CENPC1P1

Previous GeneCards Identifiers for CENPCP1 Gene

  • GC12P089896

Summaries for CENPCP1 Gene

GeneCards Summary for CENPCP1 Gene

CENPCP1 (Centromere Protein C Pseudogene 1) is a Pseudogene.

Additional gene information for CENPCP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CENPCP1 Gene

Genomics for CENPCP1 Gene

GeneHancer (GH) Regulatory Elements for CENPCP1 Gene

Promoters and enhancers for CENPCP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J089499 Enhancer 0.2 dbSUPER 650.7 +0.0 24 0.6 CENPCP1 GALNT4 ENSG00000258302 POC1B
GH12J089521 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.3 +24.2 24222 5.8 ZFP64 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 MEF2D ZNF610 GALNT4 POC1B-AS1 POC1B ENSG00000258302 DUSP6 POC1B-GALNT4 CENPCP1
GH12J089492 Enhancer 0.9 ENCODE dbSUPER 0.4 -6.3 -6345 2.2 ELF3 SOX13 SAP130 TAL1 ARID4B ZNF644 TEAD3 TCF12 ZNF316 FOXK2 ENSG00000258302 GALNT4 POC1B CENPCP1 ENSG00000271259
GH12J089505 Enhancer 0.9 ENCODE dbSUPER 0.4 +7.2 7244 2.9 SOX13 ZNF768 FOXA2 ZNF792 ZMYM3 ZNF384 CTBP1 FOSL2 SOX5 HLF GALNT4 ENSG00000258302 CENPCP1 POC1B
GH12J089496 Enhancer 0.5 ENCODE dbSUPER 0.7 -2.2 -2217 3.3 HLF GALNT4 ENSG00000258302 POC1B CENPCP1 ENSG00000271259
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CENPCP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CENPCP1 Gene

Genomic Locations for CENPCP1 Gene
chr12:89,499,908-89,503,082
(GRCh38/hg38)
Size:
3,175 bases
Orientation:
Plus strand
chr12:89,893,685-89,896,859
(GRCh37/hg19)
Size:
3,175 bases
Orientation:
Plus strand

Genomic View for CENPCP1 Gene

Genes around CENPCP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CENPCP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CENPCP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CENPCP1 Gene

Function for CENPCP1 Gene

Phenotypes From GWAS Catalog for CENPCP1 Gene

Animal Model Products

miRNA for CENPCP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for CENPCP1 Gene

Localization for CENPCP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CENPCP1 Gene

Pathways & Interactions for CENPCP1 Gene

SuperPathways for CENPCP1 Gene

No Data Available

Interacting Proteins for CENPCP1 Gene

Gene Ontology (GO) - Biological Process for CENPCP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CENPCP1 Gene

Drugs & Compounds for CENPCP1 Gene

No Compound Related Data Available

Transcripts for CENPCP1 Gene

mRNA/cDNA for CENPCP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CENPCP1 Gene

No ASD Table

Relevant External Links for CENPCP1 Gene

GeneLoc Exon Structure for
CENPCP1
ECgene alternative splicing isoforms for
CENPCP1

Expression for CENPCP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CENPCP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of CENPCP1 Gene:

CENPCP1
genes like me logo Genes that share expression patterns with CENPCP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CENPCP1 Gene

Orthologs for CENPCP1 Gene

Evolution for CENPCP1 Gene

ENSEMBL:
Gene Tree for CENPCP1 (if available)
TreeFam:
Gene Tree for CENPCP1 (if available)

No data available for Orthologs for CENPCP1 Gene

Paralogs for CENPCP1 Gene

No data available for Paralogs for CENPCP1 Gene

Variants for CENPCP1 Gene

Additional Variant Information for CENPCP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CENPCP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CENPCP1 Gene

Disorders for CENPCP1 Gene

No disorders were found for CENPCP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CENPCP1 Gene

Publications for CENPCP1 Gene

  1. In vivo functional dissection of human inner kinetochore protein CENP-C. (PMID: 12490152) Trazzi S … Della Valle G (Journal of structural biology 2002) 3 22 58
  2. Sequence homologies and linkage group conservation of the human and mouse Cenpc genes. (PMID: 7959789) McKay S … Cooke H (Genomics 1994) 2 3 58
  3. Mapping of the human CENP-B gene to chromosome 20 and the CENP-C gene to chromosome 12 by a rapid cycle DNA amplification procedure. (PMID: 8406460) Sugimoto K … Himeno M (Genomics 1993) 2 3 58
  4. The C-terminal domain of CENP-C displays multiple and critical functions for mammalian centromere formation. (PMID: 19503796) Trazzi S … Della Valle G (PloS one 2009) 22 58
  5. Mapping the assembly pathways that specify formation of the trilaminar kinetochore plates in human cells. (PMID: 17030981) Liu ST … Yen TJ (The Journal of cell biology 2006) 22 58

Products for CENPCP1 Gene

Sources for CENPCP1 Gene

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