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Aliases for CELF2-AS1 Gene

Subcategory (RNA class) for CELF2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CELF2-AS1 Gene

  • CELF2 Antisense RNA 1 2 3 4 5
  • CELF2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • C10orf31 3 4
  • Chromosome 10 Open Reading Frame 31 2
  • CELF2 Antisense Gene Protein 1 4

External Ids for CELF2-AS1 Gene

Previous HGNC Symbols for CELF2-AS1 Gene

  • C10orf31

Previous GeneCards Identifiers for CELF2-AS1 Gene

  • GC10M011358

Summaries for CELF2-AS1 Gene

GeneCards Summary for CELF2-AS1 Gene

CELF2-AS1 (CELF2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CELF2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CELF2-AS1 Gene

Genomics for CELF2-AS1 Gene

GeneHancer (GH) Regulatory Elements for CELF2-AS1 Gene

Promoters and enhancers for CELF2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I011344 Enhancer 0.5 Ensembl 550.8 -0.2 -227 0.6 L3MBTL2 GABPB1 CEBPB ZBTB40 MYC MGA GABPA CELF2-AS1 LOC105376409
GH10I011345 Enhancer 0.5 ENCODE 550.8 -1.3 -1263 0.2 CTCF RFX1 MAX BMI1 RAD21 CELF2-AS1 LOC105376409
GH10I011241 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.9 +99.7 99730 6.8 HDGF PKNOX1 SMAD1 BATF IRF4 ZNF143 ATF7 ETV6 FOS BCLAF1 CELF2-AS1 CELF2-AS2 CELF2 GC10M011231 GC10P011177
GH10I011194 Enhancer 1.3 Ensembl ENCODE dbSUPER 10.2 +147.4 147352 5.8 HDGF PKNOX1 MZF1 FEZF1 BATF IRF4 ZNF335 ZNF121 ZNF213 ZNF366 ENSG00000230322 CELF2-AS1 CELF2-AS2 GC10P011177 GC10M011231 CELF2
GH10I011234 Enhancer 1 ENCODE dbSUPER 10.5 +108.1 108062 3.7 HDGF PKNOX1 INSM2 MZF1 FEZF1 BATF KLF5 IRF4 ZSCAN5C ATF7 ENSG00000230322 CELF2-AS1 CELF2-AS2 GC10M011231 GC10P011177 CELF2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CELF2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CELF2-AS1 Gene

Genomic Locations for CELF2-AS1 Gene
chr10:11,316,833-11,344,674
(GRCh38/hg38)
Size:
27,842 bases
Orientation:
Minus strand
chr10:11,358,797-11,361,847
(GRCh37/hg19)

Genomic View for CELF2-AS1 Gene

Genes around CELF2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CELF2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CELF2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CELF2-AS1 Gene

Proteins for CELF2-AS1 Gene

  • Protein details for CELF2-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N7Q2-CEAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein CELF2-AS1
    Protein Accession:
    Q8N7Q2
    Secondary Accessions:
    • A6NFV2

    Protein attributes for CELF2-AS1 Gene

    Size:
    184 amino acids
    Molecular mass:
    20470 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAC05176.1; Type=Frameshift; Positions=168; Evidence={ECO:0000305};

neXtProt entry for CELF2-AS1 Gene

Post-translational modifications for CELF2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CELF2-AS1 Gene

Domains & Families for CELF2-AS1 Gene

Protein Domains for CELF2-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CELF2-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CELF2-AS1 Gene

Function for CELF2-AS1 Gene

Phenotypes From GWAS Catalog for CELF2-AS1 Gene

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CELF2-AS1 Gene

Localization for CELF2-AS1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CELF2-AS1 Gene

Secreted.

Gene Ontology (GO) - Cellular Components for CELF2-AS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with CELF2-AS1: view

No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for CELF2-AS1 Gene

Pathways & Interactions for CELF2-AS1 Gene

SuperPathways for CELF2-AS1 Gene

No Data Available

Interacting Proteins for CELF2-AS1 Gene

Gene Ontology (GO) - Biological Process for CELF2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CELF2-AS1 Gene

Drugs & Compounds for CELF2-AS1 Gene

No Compound Related Data Available

Transcripts for CELF2-AS1 Gene

mRNA/cDNA for CELF2-AS1 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CELF2-AS1 Gene

CELF2 antisense RNA 1:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CELF2-AS1 Gene

No ASD Table

Relevant External Links for CELF2-AS1 Gene

GeneLoc Exon Structure for
CELF2-AS1
ECgene alternative splicing isoforms for
CELF2-AS1

Expression for CELF2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CELF2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CELF2-AS1 Gene

This gene is overexpressed in Whole Blood (x7.5) and Testis (x4.6).

SOURCE GeneReport for Unigene cluster for CELF2-AS1 Gene:

Hs.729598
genes like me logo Genes that share expression patterns with CELF2-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CELF2-AS1 Gene

Orthologs for CELF2-AS1 Gene

Evolution for CELF2-AS1 Gene

ENSEMBL:
Gene Tree for CELF2-AS1 (if available)
TreeFam:
Gene Tree for CELF2-AS1 (if available)

No data available for Orthologs for CELF2-AS1 Gene

Paralogs for CELF2-AS1 Gene

No data available for Paralogs for CELF2-AS1 Gene

Variants for CELF2-AS1 Gene

Sequence variations from dbSNP and Humsavar for CELF2-AS1 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000218069 -- 11,335,913(-) G/C intron_variant
rs1000422845 -- 11,329,519(-) G/T intron_variant
rs1000491406 -- 11,323,716(-) G/A intron_variant
rs1000517290 -- 11,317,976(-) A/G non_coding_transcript_variant
rs1000555286 -- 11,345,838(-) C/G upstream_transcript_variant

Additional Variant Information for CELF2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CELF2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CELF2-AS1 Gene

Disorders for CELF2-AS1 Gene

Additional Disease Information for CELF2-AS1

No disorders were found for CELF2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CELF2-AS1 Gene

Publications for CELF2-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 58
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  3. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P … Rogers J (Nature 2004) 4 58

Products for CELF2-AS1 Gene

Sources for CELF2-AS1 Gene

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