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Aliases for CECR9 Gene

Subcategory (RNA class) for CECR9 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for CECR9 Gene

  • Cat Eye Syndrome Chromosome Region, Candidate 9 (Non-Protein Coding) 2 3 5
  • Cat Eye Syndrome Chromosome Region, Candidate 9 2

External Ids for CECR9 Gene

Previous GeneCards Identifiers for CECR9 Gene

  • GC22P014689
  • GC22U900023
  • GC22P017745
  • GC22P017813

Summaries for CECR9 Gene

GeneCards Summary for CECR9 Gene

CECR9 (Cat Eye Syndrome Chromosome Region, Candidate 9 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with CECR9 include Cat Eye Syndrome.

Additional gene information for CECR9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CECR9 Gene

Genomics for CECR9 Gene

GeneHancer (GH) Regulatory Elements for CECR9 Gene

Promoters and enhancers for CECR9 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I017329 Enhancer 0.7 ENCODE 550.8 +0.3 252 0.2 FOXA2 NEUROD1 CEBPG RAD21 YY1 CTBP1 GATA3 FOS RCOR1 SMARCE1 CECR9 GC22P017331 GC22P017330 RN7SL843P
GH22I017339 Enhancer 0.6 ENCODE 0.4 +10.2 10192 0.2 FOXA2 RXRA MAX REST RAD21 FOXA1 NR2F2 YY1 JUND ATF3 RN7SL843P CECR9
GH22I017350 Enhancer 0.3 ENCODE 0.3 +21.2 21211 0.3 GLIS1 CECR3 ADA2 RN7SL843P CECR9
GH22I017342 Enhancer 0.2 ENCODE 0.4 +13.7 13685 0.8 CECR9 RN7SL843P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CECR9 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CECR9 Gene

Genomic Locations for CECR9 Gene
199 bases
Plus strand

Genomic View for CECR9 Gene

Genes around CECR9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CECR9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CECR9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for CECR9 Gene

Proteins for CECR9 Gene

  • Protein details for CECR9 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative cat eye syndrome critical region protein 9
    Protein Accession:

    Protein attributes for CECR9 Gene

    216 amino acids
    Molecular mass:
    23602 Da
    Quaternary structure:
    No Data Available
    • Candidate gene for the Cat Eye Syndrome (CES), a developmental disorder associated with the duplication of a 2 Mb region of 22q11.2. Duplication usually takes in the form of a surpernumerary bisatellited isodicentric chromosome, resulting in four copies of the region (represents an inv dup(22)(q11)). CES is characterized clinically by the combination of coloboma of the iris and anal atresia with fistula, downslanting palpebral fissures, preauricular tags and/or pits, frequent occurrence of heart and renal malformations, and normal or near-normal mental development.

neXtProt entry for CECR9 Gene

Post-translational modifications for CECR9 Gene

No data available for DME Specific Peptides for CECR9 Gene

Domains & Families for CECR9 Gene

Protein Domains for CECR9 Gene


Suggested Antigen Peptide Sequences for CECR9 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CECR9: view

No data available for Gene Families and UniProtKB/Swiss-Prot for CECR9 Gene

Function for CECR9 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CECR9 Gene

Localization for CECR9 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CECR9 Gene


Gene Ontology (GO) - Cellular Components for CECR9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with CECR9: view

No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for CECR9 Gene

Pathways & Interactions for CECR9 Gene

SuperPathways for CECR9 Gene

No Data Available

Interacting Proteins for CECR9 Gene

Gene Ontology (GO) - Biological Process for CECR9 Gene


No data available for Pathways by source and SIGNOR curated interactions for CECR9 Gene

Drugs & Compounds for CECR9 Gene

No Compound Related Data Available

Transcripts for CECR9 Gene

mRNA/cDNA for CECR9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CECR9 Gene

No ASD Table

Relevant External Links for CECR9 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CECR9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CECR9 Gene

NURSA nuclear receptor signaling pathways regulating expression of CECR9 Gene:


SOURCE GeneReport for Unigene cluster for CECR9 Gene:


mRNA Expression by UniProt/SwissProt for CECR9 Gene:

Tissue specificity: Ubiquitously expressed with higher expression in heart.
genes like me logo Genes that share expression patterns with CECR9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CECR9 Gene

Orthologs for CECR9 Gene

Evolution for CECR9 Gene

Gene Tree for CECR9 (if available)
Gene Tree for CECR9 (if available)

No data available for Orthologs for CECR9 Gene

Paralogs for CECR9 Gene

No data available for Paralogs for CECR9 Gene

Variants for CECR9 Gene

Additional Variant Information for CECR9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CECR9 Gene

Disorders for CECR9 Gene

MalaCards: The human disease database

(1) MalaCards diseases for CECR9 Gene - From: GeneCards

Disorder Aliases PubMed IDs
cat eye syndrome
  • ces
- elite association - COSMIC cancer census association via MalaCards
Search CECR9 in MalaCards View complete list of genes associated with diseases

Additional Disease Information for CECR9

genes like me logo Genes that share disorders with CECR9: view

No data available for UniProtKB/Swiss-Prot and Genatlas for CECR9 Gene

Publications for CECR9 Gene

  1. Analysis of the cat eye syndrome critical region in humans and the region of conserved synteny in mice: a search for candidate genes at or near the human chromosome 22 pericentromere. (PMID: 11381032) Footz TK … McDermid HE (Genome research 2001) 2 3 4 58
  2. The DNA sequence of human chromosome 22. (PMID: 10591208) Dunham I … O'Brien KP (Nature 1999) 3 4 58

Products for CECR9 Gene

Sources for CECR9 Gene

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