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Aliases for CEACAM5 Gene

Aliases for CEACAM5 Gene

  • Carcinoembryonic Antigen Related Cell Adhesion Molecule 5 2 3 5
  • Carcinoembryonic Antigen-Related Cell Adhesion Molecule 5 2 3
  • Meconium Antigen 100 3 4
  • CEA 3 4
  • Carcinoembryonic Antigen 4
  • CD66e Antigen 4
  • CD66e 3

External Ids for CEACAM5 Gene

Previous HGNC Symbols for CEACAM5 Gene

  • CEA

Previous GeneCards Identifiers for CEACAM5 Gene

  • GC19P042852
  • GC19P042604
  • GC19P046888
  • GC19P046904
  • GC19P042212
  • GC19P038644
  • GC19P041576

Summaries for CEACAM5 Gene

Entrez Gene Summary for CEACAM5 Gene

  • This gene encodes a cell surface glycoprotein that represents the founding member of the carcinoembryonic antigen (CEA) family of proteins. The encoded protein is used as a clinical biomarker for gastrointestinal cancers and may promote tumor development through its role as a cell adhesion molecule. Additionally, the encoded protein may regulate differentiation, apoptosis, and cell polarity. This gene is present in a CEA family gene cluster on chromosome 19. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2015]

GeneCards Summary for CEACAM5 Gene

CEACAM5 (Carcinoembryonic Antigen Related Cell Adhesion Molecule 5) is a Protein Coding gene. Diseases associated with CEACAM5 include Lung Cancer and Rectal Neoplasm. Among its related pathways are Hematopoietic Stem Cell Differentiation Pathways and Lineage-specific Markers and Metabolism of proteins. Gene Ontology (GO) annotations related to this gene include protein homodimerization activity and GPI anchor binding. An important paralog of this gene is CEACAM1.

UniProtKB/Swiss-Prot for CEACAM5 Gene

  • Cell surface glycoprotein that plays a role in cell adhesion and in intracellular signaling. Receptor for E.coli Dr adhesins.

Gene Wiki entry for CEACAM5 Gene

Additional gene information for CEACAM5 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CEACAM5 Gene

Genomics for CEACAM5 Gene

GeneHancer (GH) Regulatory Elements for CEACAM5 Gene

Promoters and enhancers for CEACAM5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J041706 Enhancer 1.4 Ensembl ENCODE dbSUPER 650.7 -1.5 -1487 1 HDGF PKNOX1 SIN3A ZNF2 ZBTB7B E2F8 ZNF416 ZNF143 KLF13 SP3 CEACAM7 CEACAM5 ENSG00000267881 ZNF574
GH19J041708 Promoter/Enhancer 0.8 EPDnew dbSUPER 650.7 +0.0 22 0.1 KLF4 CEACAM5 CEACAM7 ENSG00000267881
GH19J041709 Promoter/Enhancer 0.8 EPDnew dbSUPER 650.7 +1.1 1057 0.1 ZNF274 CEACAM5 ENSG00000267881 ZNF526 HNRNPUL1 SNRPA ENSG00000269843 CCDC97 CEACAM6
GH19J041721 Promoter/Enhancer 0.7 EPDnew dbSUPER 650.4 +12.6 12601 0.1 CEACAM5 CEACAM4 BCKDHA EXOSC5 ENSG00000267881 CEACAM6
GH19J041715 Promoter 0.5 EPDnew 650.4 +6.7 6662 0.1 CEACAM5 ENSG00000267881 CEACAM6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CEACAM5 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the CEACAM5 gene promoter:
  • AP-1
  • NRSF form 2
  • NRSF form 1
  • NF-kappaB
  • NF-kappaB1
  • c-Fos

Genomic Locations for CEACAM5 Gene

Genomic Locations for CEACAM5 Gene
chr19:41,708,585-41,730,433
(GRCh38/hg38)
Size:
21,849 bases
Orientation:
Plus strand
chr19:42,212,504-42,234,437
(GRCh37/hg19)
Size:
21,934 bases
Orientation:
Plus strand

Genomic View for CEACAM5 Gene

Genes around CEACAM5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CEACAM5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CEACAM5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CEACAM5 Gene

Proteins for CEACAM5 Gene

  • Protein details for CEACAM5 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P06731-CEAM5_HUMAN
    Recommended name:
    Carcinoembryonic antigen-related cell adhesion molecule 5
    Protein Accession:
    P06731
    Secondary Accessions:
    • H9KVA7

    Protein attributes for CEACAM5 Gene

    Size:
    702 amino acids
    Molecular mass:
    76795 Da
    Quaternary structure:
    • Homodimer. Binding of E.coli Dr adhesins leads to dissociation of the homodimer.
    SequenceCaution:
    • Sequence=AAA62835.1; Type=Frameshift; Positions=359, 361; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for CEACAM5 Gene

    Alternative splice isoforms for CEACAM5 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for CEACAM5 Gene

Post-translational modifications for CEACAM5 Gene

  • Complex immunoreactive glycoprotein with a MW of 180 kDa comprising 60% carbohydrate.
  • Glycosylation at posLast=665665, Asn650, Asn612, Asn580, Asn560, Asn553, Asn529, posLast=508508, posLast=480480, posLast=466466, posLast=432432, posLast=375375, Asn360, posLast=351351, posLast=330330, Asn309, posLast=292292, posLast=288288, posLast=274274, Asn256, posLast=246246, Asn208, Asn204, posLast=197197, Asn182, posLast=152152, posLast=115115, and posLast=104104
  • Modification sites at PhosphoSitePlus

Antibody Products

  • R&D Systems Antibodies for CEACAM5 (CEACAM-5/CD66e)

No data available for DME Specific Peptides for CEACAM5 Gene

Domains & Families for CEACAM5 Gene

Gene Families for CEACAM5 Gene

Graphical View of Domain Structure for InterPro Entry

P06731

UniProtKB/Swiss-Prot:

CEAM5_HUMAN :
  • Belongs to the immunoglobulin superfamily. CEA family.
Family:
  • Belongs to the immunoglobulin superfamily. CEA family.
genes like me logo Genes that share domains with CEACAM5: view

Function for CEACAM5 Gene

Molecular function for CEACAM5 Gene

UniProtKB/Swiss-Prot Function:
Cell surface glycoprotein that plays a role in cell adhesion and in intracellular signaling. Receptor for E.coli Dr adhesins.
GENATLAS Biochemistry:
carcinoembryonic antigen-related cell adhesion molecule 5

Phenotypes From GWAS Catalog for CEACAM5 Gene

Gene Ontology (GO) - Molecular Function for CEACAM5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0034235 GPI anchor binding IMP 10931872
GO:0042802 identical protein binding IPI 10864933
GO:0042803 protein homodimerization activity IDA 18086185
genes like me logo Genes that share ontologies with CEACAM5: view
genes like me logo Genes that share phenotypes with CEACAM5: view

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for CEACAM5 Gene

Localization for CEACAM5 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CEACAM5 Gene

Cell membrane; Lipid-anchor, GPI-anchor.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for CEACAM5 gene
Compartment Confidence
plasma membrane 5
extracellular 5
cytoskeleton 3
mitochondrion 2
nucleus 2
cytosol 2
peroxisome 1
endoplasmic reticulum 1
lysosome 1
golgi apparatus 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Plasma membrane (3)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for CEACAM5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region TAS --
GO:0005886 plasma membrane TAS,IDA --
GO:0005887 integral component of plasma membrane TAS,IDA 10931872
GO:0016020 membrane IEA --
GO:0016323 basolateral plasma membrane IDA 15052268
genes like me logo Genes that share ontologies with CEACAM5: view

Pathways & Interactions for CEACAM5 Gene

genes like me logo Genes that share pathways with CEACAM5: view

Pathways by source for CEACAM5 Gene

Gene Ontology (GO) - Biological Process for CEACAM5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006501 C-terminal protein lipidation TAS --
GO:0010832 negative regulation of myotube differentiation IDA 8408226
GO:0034109 homotypic cell-cell adhesion IDA 10864933
GO:0043066 negative regulation of apoptotic process IDA 11448920
GO:0050900 leukocyte migration TAS --
genes like me logo Genes that share ontologies with CEACAM5: view

No data available for SIGNOR curated interactions for CEACAM5 Gene

Drugs & Compounds for CEACAM5 Gene

(28) Drugs for CEACAM5 Gene - From: DrugBank, DGIdb, and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
S-[(1-Hydroxy-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate Experimental Pharma Target 0
CEA/MUC-1/VF/TRICOM Pharma 0
TF2 Pharma 0

(33) Additional Compounds for CEACAM5 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with CEACAM5: view

Transcripts for CEACAM5 Gene

Unigene Clusters for CEACAM5 Gene

Carcinoembryonic antigen-related cell adhesion molecule 5:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CEACAM5 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7a · 7b · 7c ^ 8 ^ 9a · 9b ^ 10a · 10b ^ 11a · 11b ^ 12a · 12b · 12c · 12d
SP1:
SP2: - - - - - - - - - - - - - - -
SP3:
SP4:
SP5: -
SP6: - - - - - - - - -
SP7:
SP8: - - - - -
SP9:

Relevant External Links for CEACAM5 Gene

GeneLoc Exon Structure for
CEACAM5
ECgene alternative splicing isoforms for
CEACAM5

Expression for CEACAM5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CEACAM5 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for CEACAM5 Gene

This gene is overexpressed in Colon - Transverse (x30.9) and Esophagus - Mucosa (x11.7).

Protein differential expression in normal tissues from HIPED for CEACAM5 Gene

This gene is overexpressed in Nasal epithelium (44.1) and Cervix (13.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for CEACAM5 Gene



NURSA nuclear receptor signaling pathways regulating expression of CEACAM5 Gene:

CEACAM5

SOURCE GeneReport for Unigene cluster for CEACAM5 Gene:

Hs.709196

mRNA Expression by UniProt/SwissProt for CEACAM5 Gene:

P06731-CEAM5_HUMAN
Tissue specificity: Found in adenocarcinomas of endodermally derived digestive system epithelium and fetal colon.

Evidence on tissue expression from TISSUES for CEACAM5 Gene

  • Intestine(5)
  • Liver(4.6)
  • Saliva(4.2)
  • Stomach(3.9)
  • Lung(3.2)
  • Blood(3.1)
  • Lymph node(3.1)
  • Pancreas(3)
  • Kidney(2.6)
  • Gall bladder(2.5)
  • Skin(2.3)
  • Thyroid gland(2.3)
  • Spleen(2.2)
genes like me logo Genes that share expression patterns with CEACAM5: view

No data available for Protein tissue co-expression partners and Phenotype-based relationships between genes and organs from Gene ORGANizer for CEACAM5 Gene

Orthologs for CEACAM5 Gene

This gene was present in the common ancestor of chordates.

Orthologs for CEACAM5 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CEACAM5 33
  • 98.77 (n)
-- 34
  • 97 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Ceacam1 34
  • 43 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia CEACAM1 34
  • 43 (a)
ManyToMany
-- 34
  • 36 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia -- 34
  • 39 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii si:ch211-264f5.6 33
  • 44.03 (n)
Species where no ortholog for CEACAM5 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for CEACAM5 Gene

ENSEMBL:
Gene Tree for CEACAM5 (if available)
TreeFam:
Gene Tree for CEACAM5 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for CEACAM5: view image

Paralogs for CEACAM5 Gene

(25) SIMAP similar genes for CEACAM5 Gene using alignment to 6 proteins:

  • CEAM5_HUMAN
  • M0QX98_HUMAN
  • M0R3J1_HUMAN
  • Q8N4D0_HUMAN
  • T2HUW8_HUMAN
  • T2HVB7_HUMAN

Pseudogenes.org Pseudogenes for CEACAM5 Gene

genes like me logo Genes that share paralogs with CEACAM5: view

Variants for CEACAM5 Gene

Sequence variations from dbSNP and Humsavar for CEACAM5 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000204119 -- 41,709,798(+) T/C coding_sequence_variant, synonymous_variant
rs1000562935 -- 41,722,130(+) G/A intron_variant
rs1000571883 -- 41,716,346(+) T/C intron_variant
rs1001088272 -- 41,710,718(+) C/T intron_variant
rs1001236321 -- 41,725,181(+) A/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for CEACAM5 Gene

Variant ID Type Subtype PubMed ID
esv2718577 CNV deletion 23290073
nsv1061309 CNV gain 25217958
nsv482220 CNV gain 20164927
nsv522854 CNV gain 19592680
nsv579615 CNV gain 21841781
nsv963052 CNV duplication 23825009
nsv978820 CNV duplication 23825009
nsv978821 CNV duplication 23825009

Variation tolerance for CEACAM5 Gene

Residual Variation Intolerance Score: 91.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.68; 65.96% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for CEACAM5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CEACAM5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CEACAM5 Gene

Disorders for CEACAM5 Gene

MalaCards: The human disease database

(145) MalaCards diseases for CEACAM5 Gene - From: LncRNADisease, DISEASES, Novoseek, and GeneCards

Disorder Aliases PubMed IDs
lung cancer
  • lung cancer, susceptibility to
rectal neoplasm
  • neoplasm of rectum
papillary adenocarcinoma
  • infiltrating and papillary adenocarcinoma
urachal cancer
  • urachal carcinoma
colorectal cancer
  • crc
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for CEACAM5

genes like me logo Genes that share disorders with CEACAM5: view

No data available for UniProtKB/Swiss-Prot and Genatlas for CEACAM5 Gene

Publications for CEACAM5 Gene

  1. DC-SIGN and SRCL bind glycans of carcinoembryonic antigen (CEA) and CEA-related cell adhesion molecule 1 (CEACAM1): recombinant human glycan-binding receptors as analytical tools. (PMID: 20034698) Samsen A … Wagener C (European journal of cell biology 2010) 3 22 58
  2. Lead time of carcinoembryonic antigen elevation in the postoperative follow-up of colorectal cancer did not affect the survival rate after recurrence. (PMID: 20162425) Chen CH … Wang JY (International journal of colorectal disease 2010) 3 22 58
  3. Survival and prognostic factors in small cell lung cancer. (PMID: 19214813) Li J … Li XQ (Medical oncology (Northwood, London, England) 2010) 3 22 58
  4. The impact of carcinoembryonic antigen flare in patients with advanced colorectal cancer receiving first-line chemotherapy. (PMID: 19861580) Strimpakos AS … Chau I (Annals of oncology : official journal of the European Society for Medical Oncology 2010) 3 22 58
  5. Carcinoembryonic antigen surge in metastatic colorectal cancer patients responding to irinotecan combination chemotherapy. (PMID: 20121626) An X … Li YH (Biomarkers : biochemical indicators of exposure, response, and susceptibility to chemicals 2010) 3 22 58

Products for CEACAM5 Gene

Sources for CEACAM5 Gene

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