Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CDR1-AS Gene

Subcategory (RNA class) for CDR1-AS Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for CDR1-AS Gene

  • CDR1 Antisense RNA 2 3
  • CDR1 Natural Antisense Transcript 2 3
  • Circular RNA Sponge For MiR-7 2 3
  • CDR1NAT 3
  • CDR1as 3
  • CiRS-7 3

External Ids for CDR1-AS Gene

Previous GeneCards Identifiers for CDR1-AS Gene

  • GC00U934304
  • GC0XP140783

Summaries for CDR1-AS Gene

Entrez Gene Summary for CDR1-AS Gene

  • This gene represents naturally-occurring RNAs transcribed in antisense to CDR1 (cerebellar degeneration-related protein 1, 34kDa; GeneID:1038), some of which may be circular rather than linear. Antisense circular RNAs bind microRNAs such as miR-7, acting as a sponge for these molecules and preventing them from interacting with target transcripts. The circular RNA produced by this locus is down-regulated by miR-671, which also decreases levels of the CDR1 transcript. No RefSeq transcript is created for the circular RNA. [provided by RefSeq, Jul 2014]

GeneCards Summary for CDR1-AS Gene

CDR1-AS (CDR1 Antisense RNA) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CDR1-AS Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CDR1-AS Gene

Genomics for CDR1-AS Gene

Genomic Locations for CDR1-AS Gene

Genomic Locations for CDR1-AS Gene
chrX:-
(GRCh38/hg38)
Orientation:
Unknown strand

Genomic View for CDR1-AS Gene


Cytogenetic band:
GeneLoc Logo Gene Density

No data available for GeneHancer (GH) Regulatory Elements and RefSeq DNA sequence for CDR1-AS Gene

Proteins for CDR1-AS Gene

Post-translational modifications for CDR1-AS Gene

No Post-translational modifications

No data available for DME Specific Peptides for CDR1-AS Gene

Domains & Families for CDR1-AS Gene

Gene Families for CDR1-AS Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CDR1-AS: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CDR1-AS Gene

Function for CDR1-AS Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CDR1-AS Gene

Localization for CDR1-AS Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CDR1-AS Gene

Pathways & Interactions for CDR1-AS Gene

SuperPathways for CDR1-AS Gene

No Data Available

Interacting Proteins for CDR1-AS Gene

Gene Ontology (GO) - Biological Process for CDR1-AS Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CDR1-AS Gene

Drugs & Compounds for CDR1-AS Gene

No Compound Related Data Available

Transcripts for CDR1-AS Gene

Alternative Splicing Database (ASD) splice patterns (SP) for CDR1-AS Gene

No ASD Table

Relevant External Links for CDR1-AS Gene

ECgene alternative splicing isoforms for
CDR1-AS

No data available for mRNA/cDNA for CDR1-AS Gene

Expression for CDR1-AS Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CDR1-AS Gene

Orthologs for CDR1-AS Gene

No data available for Orthologs and Evolution for CDR1-AS Gene

Paralogs for CDR1-AS Gene

No data available for Paralogs for CDR1-AS Gene

Variants for CDR1-AS Gene

Additional Variant Information for CDR1-AS Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CDR1-AS

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CDR1-AS Gene

Disorders for CDR1-AS Gene

Additional Disease Information for CDR1-AS

No disorders were found for CDR1-AS Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CDR1-AS Gene

Publications for CDR1-AS Gene

  1. Circular RNAs are a large class of animal RNAs with regulatory potency. (PMID: 23446348) Memczak S … Rajewsky N (Nature 2013) 2 3 58
  2. Natural RNA circles function as efficient microRNA sponges. (PMID: 23446346) Hansen TB … Kjems J (Nature 2013) 2 3 58
  3. miRNA-dependent gene silencing involving Ago2-mediated cleavage of a circular antisense RNA. (PMID: 21964070) Hansen TB … Kjems J (The EMBO journal 2011) 2 3 58
  4. Overexpression of Circular RNA ciRS-7 Abrogates the Tumor Suppressive Effect of miR-7 on Gastric Cancer via PTEN/PI3K/AKT Signaling Pathway. (PMID: 28608528) Pan H … Kong D (Journal of cellular biochemistry 2018) 3 58
  5. Detection and characterization of ciRS-7: a potential promoter of the development of cancer. (PMID: 28253710) Zheng XB … Xu MQ (Neoplasma 2017) 3 58

Products for CDR1-AS Gene

Sources for CDR1-AS Gene

Content
Loading form....