Aliases for CDKN2AIPNLP1 Gene

Aliases for CDKN2AIPNLP1 Gene

  • CDKN2A Interacting Protein N-Terminal Like Pseudogene 1 2 3 5
  • CDKN2AIPNLP1 5
  • HCG2040210 3

External Ids for CDKN2AIPNLP1 Gene

Previous GeneCards Identifiers for CDKN2AIPNLP1 Gene

  • GC01M226682

Summaries for CDKN2AIPNLP1 Gene

GeneCards Summary for CDKN2AIPNLP1 Gene

CDKN2AIPNLP1 (CDKN2A Interacting Protein N-Terminal Like Pseudogene 1) is a Pseudogene.

Additional gene information for CDKN2AIPNLP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CDKN2AIPNLP1 Gene

Genomics for CDKN2AIPNLP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CDKN2AIPNLP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J226491 Enhancer 0.3 Ensembl 250.7 +1.8 1793 1.4 ZSCAN29 CDKN2AIPNLP1 STUM HSALNG0011081 PARP1
GH01J226488 Enhancer 0.4 Ensembl 0.7 +5.0 4982 1.4 JUND CTCF MZF1 STUM CDKN2AIPNLP1 HSALNG0011081 PARP1
GH01J226495 Enhancer 0.4 Ensembl 0.7 -3.0 -3006 1.8 ZNF664 EGR2 ZFHX2 HSALNG0011082 STUM PYCR2 CDKN2AIPNLP1 PARP1
GH01J226483 Enhancer 0.6 Ensembl 0.4 +10.7 10680 2 ZNF768 ZMYM3 GATA2 CEBPB EGR2 ZNF692 ZBTB17 ZFHX2 ZBTB20 ZNF621 STUM CDC42BPA PARP1 HSALNG0011081 CDKN2AIPNLP1
GH01J226490 Enhancer 0.3 Ensembl 0.7 +3.1 3094 0.8 ZFHX2 STUM CDKN2AIPNLP1 HSALNG0011081 PARP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CDKN2AIPNLP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CDKN2AIPNLP1 Gene

Latest Assembly
chr1:226,492,438-226,493,494
(GRCh38/hg38)
Size:
1,057 bases
Orientation:
Minus strand

Previous Assembly
chr1:226,680,139-226,681,195
(GRCh37/hg19 by Entrez Gene)
Size:
1,057 bases
Orientation:
Minus strand

chr1:226,680,889-226,681,190
(GRCh37/hg19 by Ensembl)
Size:
302 bases
Orientation:
Minus strand

Genomic View for CDKN2AIPNLP1 Gene

Genes around CDKN2AIPNLP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CDKN2AIPNLP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CDKN2AIPNLP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CDKN2AIPNLP1 Gene

Proteins for CDKN2AIPNLP1 Gene

Post-translational modifications for CDKN2AIPNLP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CDKN2AIPNLP1 Gene

Domains & Families for CDKN2AIPNLP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CDKN2AIPNLP1 Gene

Function for CDKN2AIPNLP1 Gene

Phenotypes From GWAS Catalog for CDKN2AIPNLP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CDKN2AIPNLP1 Gene

Localization for CDKN2AIPNLP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CDKN2AIPNLP1 Gene

Pathways & Interactions for CDKN2AIPNLP1 Gene

PathCards logo

SuperPathways for CDKN2AIPNLP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CDKN2AIPNLP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CDKN2AIPNLP1 Gene

Drugs & Compounds for CDKN2AIPNLP1 Gene

No Compound Related Data Available

Transcripts for CDKN2AIPNLP1 Gene

mRNA/cDNA for CDKN2AIPNLP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CDKN2AIPNLP1 Gene

No ASD Table

Relevant External Links for CDKN2AIPNLP1 Gene

GeneLoc Exon Structure for
CDKN2AIPNLP1

Expression for CDKN2AIPNLP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CDKN2AIPNLP1 Gene

genes like me logo Genes that share expression patterns with CDKN2AIPNLP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CDKN2AIPNLP1 Gene

Orthologs for CDKN2AIPNLP1 Gene

Evolution for CDKN2AIPNLP1 Gene

ENSEMBL:
Gene Tree for CDKN2AIPNLP1 (if available)
TreeFam:
Gene Tree for CDKN2AIPNLP1 (if available)
Alliance of Genome Resources:
Additional Orthologs for CDKN2AIPNLP1

No data available for Orthologs for CDKN2AIPNLP1 Gene

Paralogs for CDKN2AIPNLP1 Gene

No data available for Paralogs for CDKN2AIPNLP1 Gene

Variants for CDKN2AIPNLP1 Gene

Additional Variant Information for CDKN2AIPNLP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CDKN2AIPNLP1
Leiden Open Variation Database (LOVD)
CDKN2AIPNLP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CDKN2AIPNLP1 Gene

Disorders for CDKN2AIPNLP1 Gene

No disorders were found for CDKN2AIPNLP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CDKN2AIPNLP1 Gene

Publications for CDKN2AIPNLP1 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3

Products for CDKN2AIPNLP1 Gene

Sources for CDKN2AIPNLP1 Gene