Aliases for CD46P1 Gene

Aliases for CD46P1 Gene

  • CD46 Molecule Pseudogene 1 2 3 5
  • Membrane Cofactor Protein-Like (CD46-Like, Trophoblast-Lymphocyte Cross-Reactive Antigen-Like) 2 3
  • CD46 Molecule, Complement Regulatory Protein Pseudogene 1 2 3
  • CD46 Molecule, Complement Regulatory Protein Pseudogene 2
  • MCPL1 3
  • CD46P 3
  • MCPL 3

External Ids for CD46P1 Gene

Previous HGNC Symbols for CD46P1 Gene

  • MCPL
  • CD46P

Previous GeneCards Identifiers for CD46P1 Gene

  • GC01P207825
  • GC01P178492
  • GC01P207827

Summaries for CD46P1 Gene

GeneCards Summary for CD46P1 Gene

CD46P1 (CD46 Molecule Pseudogene 1) is a Pseudogene.

Additional gene information for CD46P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CD46P1 Gene

Genomics for CD46P1 Gene

GeneHancer (GH) Regulatory Elements for CD46P1 Gene

Promoters and enhancers for CD46P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J207644 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 +0.6 570 2.9 SIN3A NRF1 SP1 ZBTB5 ZIC2 AFF1 ZBTB26 TARDBP TOE1 CTBP1 CD46P1 CR1L C4BPA MIR29B2CHG CD46 CDCA4P3
GH01J207649 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.7 +4.9 4864 1.8 ZSCAN5C PHB2 ZIC2 ZBTB11 AFF1 MYC CTBP1 JUN HINFP TAF9B CR1L C4BPA MIR29B2CHG CR2 CD46P1 CDCA4P3
GH01J207648 Enhancer 0.7 FANTOM5 dbSUPER 0.7 +3.4 3447 0.2 ARNT MNT FOXK2 PRDM10 MAX GATA1 ZNF24 CBFA2T3 IKZF1 CR1L C4BPA MIR29B2CHG CD46P1 CDCA4P3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CD46P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CD46P1 Gene

Genomic Locations for CD46P1 Gene
chr1:207,645,084-207,657,410
(GRCh38/hg38)
Size:
12,327 bases
Orientation:
Plus strand
chr1:207,818,429-207,830,755
(GRCh37/hg19)
Size:
12,327 bases
Orientation:
Plus strand

Genomic View for CD46P1 Gene

Genes around CD46P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CD46P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CD46P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CD46P1 Gene

Proteins for CD46P1 Gene

Post-translational modifications for CD46P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CD46P1 Gene

Domains & Families for CD46P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CD46P1 Gene

Function for CD46P1 Gene

Phenotypes for CD46P1 Gene

genes like me logo Genes that share phenotypes with CD46P1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CD46P1 Gene

Localization for CD46P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CD46P1 Gene

Pathways & Interactions for CD46P1 Gene

PathCards logo

SuperPathways for CD46P1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for CD46P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CD46P1 Gene

Drugs & Compounds for CD46P1 Gene

No Compound Related Data Available

Transcripts for CD46P1 Gene

mRNA/cDNA for CD46P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for CD46P1 Gene

No ASD Table

Relevant External Links for CD46P1 Gene

GeneLoc Exon Structure for
CD46P1

Expression for CD46P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CD46P1 Gene

mRNA differential expression in normal tissues according to GTEx for CD46P1 Gene

This gene is overexpressed in Whole Blood (x27.3) and Spleen (x7.8).
genes like me logo Genes that share expression patterns with CD46P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CD46P1 Gene

Orthologs for CD46P1 Gene

Evolution for CD46P1 Gene

ENSEMBL:
Gene Tree for CD46P1 (if available)
TreeFam:
Gene Tree for CD46P1 (if available)

No data available for Orthologs for CD46P1 Gene

Paralogs for CD46P1 Gene

No data available for Paralogs for CD46P1 Gene

Variants for CD46P1 Gene

Additional Variant Information for CD46P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CD46P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CD46P1 Gene

Disorders for CD46P1 Gene

No disorders were found for CD46P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CD46P1 Gene

Publications for CD46P1 Gene

  1. Analysis of the human regulators of complement activation (RCA) gene cluster with yeast artificial chromosomes (YACs). (PMID: 1740338) Hourcade D … Atkinson JP (Genomics 1992) 2 3 54
  2. Three SIBLINGs (small integrin-binding ligand, N-linked glycoproteins) enhance factor H's cofactor activity enabling MCP-like cellular evasion of complement-mediated attack. (PMID: 11825898) Jain A … Fedarko NS (The Journal of biological chemistry 2002) 23 54
  3. Characterization of the promoter region of the membrane cofactor protein (CD46) gene of the human complement system and comparison to a membrane cofactor protein-like genetic element. (PMID: 7691939) Cui W … Kumar V (Journal of immunology (Baltimore, Md. : 1950) 1993) 23 54
  4. Characterization of CR1- and membrane cofactor protein-like proteins of two primates. (PMID: 2140391) Nickells MW … Atkinson JP (Journal of immunology (Baltimore, Md. : 1950) 1990) 23 54

Products for CD46P1 Gene

Sources for CD46P1 Gene