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Aliases for CCT5-2P Gene

Aliases for CCT5-2P Gene

  • Chaperonin Containing TCP1, Subunit 5 (Epsilon) Pseudogene 2 3

External Ids for CCT5-2P Gene

Previous GeneCards Identifiers for CCT5-2P Gene

  • GC13U900740
  • GC13M079484

Summaries for CCT5-2P Gene

GeneCards Summary for CCT5-2P Gene

CCT5-2P (Chaperonin Containing TCP1, Subunit 5 (Epsilon) Pseudogene 2) is a Pseudogene.

Additional gene information for CCT5-2P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCT5-2P Gene

Genomics for CCT5-2P Gene

GeneHancer (GH) Regulatory Elements for CCT5-2P Gene

Promoters and enhancers for CCT5-2P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J078978 Enhancer 0.7 ENCODE 0.2 -67.8 -67770 0.1 CTCF PKNOX1 FOXA2 MAX RAD21 SCRT2 ZNF143 SMC3 SMARCA5 ZNF654 LOC105370273 CCT5-2P
GH13J078934 Enhancer 0.4 UCNEbase 0.3 -23.9 -23893 0.2 CCT5-2P LOC105370273
GH13J078957 Enhancer 0.6 UCNEbase 0.2 -47.2 -47161 0.4 ZNF316 MAFK LOC105370273 CCT5-2P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CCT5-2P on UCSC Golden Path with GeneCards custom track

Genomic Locations for CCT5-2P Gene

Genomic Locations for CCT5-2P Gene
chr13:78,910,722-78,910,831
(GRCh38/hg38)
Size:
110 bases
Orientation:
Minus strand
chr13:79,484,857-79,484,966
(GRCh37/hg19)
Size:
110 bases
Orientation:
Minus strand

Genomic View for CCT5-2P Gene

Genes around CCT5-2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCT5-2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCT5-2P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCT5-2P Gene

Function for CCT5-2P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCT5-2P Gene

Localization for CCT5-2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CCT5-2P Gene

Pathways & Interactions for CCT5-2P Gene

SuperPathways for CCT5-2P Gene

No Data Available

Interacting Proteins for CCT5-2P Gene

Gene Ontology (GO) - Biological Process for CCT5-2P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CCT5-2P Gene

Drugs & Compounds for CCT5-2P Gene

No Compound Related Data Available

Transcripts for CCT5-2P Gene

Alternative Splicing Database (ASD) splice patterns (SP) for CCT5-2P Gene

No ASD Table

Relevant External Links for CCT5-2P Gene

GeneLoc Exon Structure for
CCT5-2P

No data available for mRNA/cDNA for CCT5-2P Gene

Expression for CCT5-2P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCT5-2P Gene

Orthologs for CCT5-2P Gene

No data available for Orthologs and Evolution for CCT5-2P Gene

Paralogs for CCT5-2P Gene

No data available for Paralogs for CCT5-2P Gene

Variants for CCT5-2P Gene

Additional Variant Information for CCT5-2P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCT5-2P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCT5-2P Gene

Disorders for CCT5-2P Gene

No disorders were found for CCT5-2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CCT5-2P Gene

Publications for CCT5-2P Gene

  1. Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes. (PMID: 20193073) Mukherjee K … Brocchieri L (BMC evolutionary biology 2010) 3 58
  2. The DNA sequence and analysis of human chromosome 13. (PMID: 15057823) Dunham A … Ross MT (Nature 2004) 3 58
  3. Finishing the euchromatic sequence of the human genome. (PMID: 15496913) International Human Genome Sequencing Consortium (Nature 2004) 3 58
  4. Initial sequencing and analysis of the human genome. (PMID: 11237011) Lander ES … International Human Genome Sequencing Consortium (Nature 2001) 3 58

Products for CCT5-2P Gene

Sources for CCT5-2P Gene

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