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Aliases for CCT4P1 Gene

Aliases for CCT4P1 Gene

  • Chaperonin Containing TCP1 Subunit 4 Pseudogene 1 2 3 5
  • Chaperonin Containing TCP1, Subunit 4 (Delta) Pseudogene 1 2 3
  • CCT4-2P 3

External Ids for CCT4P1 Gene

Previous GeneCards Identifiers for CCT4P1 Gene

  • GC00U922978
  • GC07M140698
  • GC07M134993

Summaries for CCT4P1 Gene

GeneCards Summary for CCT4P1 Gene

CCT4P1 (Chaperonin Containing TCP1 Subunit 4 Pseudogene 1) is a Pseudogene.

Additional gene information for CCT4P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCT4P1 Gene

Genomics for CCT4P1 Gene

GeneHancer (GH) Regulatory Elements for CCT4P1 Gene

Promoters and enhancers for CCT4P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J140637 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 14.6 +360.0 359961 5.6 HDGF SIN3A GLI4 ZNF2 YY1 GLIS2 ZNF416 KLF7 ATF7 KLF13 LOC105375535 DENND2A CCT4P1 RNU4-74P SLC37A3 NDUFB2 NDUFB2-AS1 BRAF PARP12 ADCK2
GH07J140174 Promoter/Enhancer 1.6 Ensembl ENCODE 14.6 +823.3 823313 3.4 FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 ZFP41 GLIS1 KDM7A KDM7A-DT GC07P140176 UBN2 CCT4P1 RNU4-74P BRAF SLC37A3 LUC7L2 PARP12
GH07J140396 Enhancer 0.9 ENCODE 14.6 +603.2 603184 0.2 PKNOX1 CLOCK FEZF1 ZNF2 BRCA1 YY1 ZNF213 KLF7 KLF13 YY2 RNU4-74P CCT4P1 RAB19 RNA5SP248 SLC37A3
GH07J141074 Enhancer 0.8 ENCODE 14.7 -74.8 -74766 0.6 ZSCAN4 SIN3A ZNF2 YY1 ZNF335 EGR2 YY2 ZBTB11 ZNF398 ELF1 TMEM178B RNU4-74P CCT4P1 OR9A4 WEE2-AS1 ENSG00000261778
GH07J141013 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.4 -14.5 -14532 2.6 FEZF1 DMAP1 YY1 E2F8 ZNF143 SP3 NFYC MEF2D GLIS1 NBN MRPS33 TAS2R5 TAS2R6P SLC37A3 TMEM178B BRAF NDUFB2-AS1 NDUFB2 CCT4P1 LOC105375536
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CCT4P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CCT4P1 Gene

Genomic Locations for CCT4P1 Gene
chr7:140,997,744-140,999,800
(GRCh38/hg38)
Size:
2,057 bases
Orientation:
Minus strand
chr7:140,697,740-140,699,600
(GRCh37/hg19)
Size:
1,861 bases
Orientation:
Minus strand

Genomic View for CCT4P1 Gene

Genes around CCT4P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCT4P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCT4P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCT4P1 Gene

Function for CCT4P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCT4P1 Gene

Localization for CCT4P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CCT4P1 Gene

Pathways & Interactions for CCT4P1 Gene

SuperPathways for CCT4P1 Gene

No Data Available

Interacting Proteins for CCT4P1 Gene

Gene Ontology (GO) - Biological Process for CCT4P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CCT4P1 Gene

Drugs & Compounds for CCT4P1 Gene

No Compound Related Data Available

Transcripts for CCT4P1 Gene

mRNA/cDNA for CCT4P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CCT4P1 Gene

No ASD Table

Relevant External Links for CCT4P1 Gene

GeneLoc Exon Structure for
CCT4P1
ECgene alternative splicing isoforms for
CCT4P1

Expression for CCT4P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CCT4P1 Gene

mRNA differential expression in normal tissues according to GTEx for CCT4P1 Gene

This gene is overexpressed in Testis (x44.9).

NURSA nuclear receptor signaling pathways regulating expression of CCT4P1 Gene:

CCT4P1
genes like me logo Genes that share expression patterns with CCT4P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCT4P1 Gene

Orthologs for CCT4P1 Gene

Evolution for CCT4P1 Gene

ENSEMBL:
Gene Tree for CCT4P1 (if available)
TreeFam:
Gene Tree for CCT4P1 (if available)

No data available for Orthologs for CCT4P1 Gene

Paralogs for CCT4P1 Gene

No data available for Paralogs for CCT4P1 Gene

Variants for CCT4P1 Gene

Additional Variant Information for CCT4P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCT4P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCT4P1 Gene

Disorders for CCT4P1 Gene

No disorders were found for CCT4P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CCT4P1 Gene

Publications for CCT4P1 Gene

  1. Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes. (PMID: 20193073) Mukherjee K … Brocchieri L (BMC evolutionary biology 2010) 3 58
  2. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier LW … Wilson RK (Nature 2003) 3 58

Products for CCT4P1 Gene

Sources for CCT4P1 Gene

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