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CCSER1 (Coiled-Coil Serine Rich Protein 1) is a Protein Coding gene. An important paralog of this gene is CCSER2.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH04J090126 | Promoter/Enhancer | 2.1 | EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas | 262.1 | +1.0 | 1007 | 3.6 | ZBTB10 FEZF1 ZNF217 POLR2A ZEB1 ZIC2 ZNF610 CEBPB SIN3A ZNF639 | CCSER1 piR-30491 | |
GH04J090649 | Promoter | 0.3 | EPDnew | 250 | +522.1 | 522095 | 0.1 | HSALNG0035809 CCSER1 HSALNG0035808 | ||
GH04J089994 | Enhancer | 1.1 | VISTA Ensembl ENCODE | 9.6 | -130.4 | -130379 | 5.8 | CEBPA FOXA1 ZFP64 FOXA2 FOXP1 SOX5 HNF4A SP1 GATA2 ZSCAN4 | ENSG00000287239 CCSER1 SNCA piR-31937-159 MMRN1 | |
GH04J089929 | Enhancer | 1 | FANTOM5 Ensembl ENCODE | 9.9 | -197.7 | -197693 | 1.4 | BCL11A IKZF1 BMI1 ZNF217 ARID3A ATF7 SPI1 IKZF2 MTA2 DPF2 | CCSER1 HSALNG0035800 HSALNG0035799 MMRN1 | |
GH04J090027 | Enhancer | 0.9 | Ensembl ENCODE | 10.9 | -100.1 | -100093 | 2.6 | BCL11A TRIM22 SPI1 BHLHE40 ZNF24 ELF1 IKZF1 BMI1 NR2F1 ATF2 | CCSER1 piR-31937-159 LOC105377331 MMRN1 |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005515 | protein binding | IPI | -- |
This gene was present in the common ancestor of chordates.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Chimpanzee (Pan troglodytes) |
Mammalia | FAM190A 30 |
|
||
CCSER1 31 |
|
OneToOne | |||
Dog (Canis familiaris) |
Mammalia | FAM190A 30 |
|
||
CCSER1 31 |
|
OneToOne | |||
Cow (Bos Taurus) |
Mammalia | CCSER1 30 31 |
|
OneToOne | |
Mouse (Mus musculus) |
Mammalia | Ccser1 30 17 31 |
|
OneToOne | |
Rat (Rattus norvegicus) |
Mammalia | Ccser1 30 |
|
||
Platypus (Ornithorhynchus anatinus) |
Mammalia | CCSER1 31 |
|
OneToOne | |
Chicken (Gallus gallus) |
Aves | FAM190A 30 |
|
||
CCSER1 31 |
|
OneToOne | |||
Lizard (Anolis carolinensis) |
Reptilia | CCSER1 31 |
|
OneToOne | |
Tropical Clawed Frog (Silurana tropicalis) |
Amphibia | ccser1 30 |
|
||
Zebrafish (Danio rerio) |
Actinopterygii | si:dkey-53d10.1 30 |
|
||
CCSER1 31 |
|
OneToOne |
SNP ID | Clinical significance and condition | Chr 04 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
rs76504638 | Benign: not provided | 91,085,978(+) |
T/C NM_001145065.1(CCSER1):c.2201T>C (p.Val734Ala) |
MISSENSE | |
rs12647859 | - |
p.Gly382Ser |
No disorders were found for CCSER1 Gene.