Aliases for CCNYL6 Gene

Aliases for CCNYL6 Gene

  • Cyclin Y Like 6 (Pseudogene) 2 3
  • Cyclin Y-Like 1 (CCNYL1) Pseudogene 5
  • Cyclin Y Like 1 Pseudogene 3
  • AC092364.2 5

External Ids for CCNYL6 Gene

Summaries for CCNYL6 Gene

GeneCards Summary for CCNYL6 Gene

CCNYL6 (Cyclin Y Like 6 (Pseudogene)) is a Pseudogene.

Additional gene information for CCNYL6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CCNYL6 Gene

Genomics for CCNYL6 Gene

GeneHancer (GH) Regulatory Elements for CCNYL6 Gene

Promoters and enhancers for CCNYL6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J021750 Enhancer 0.4 ENCODE 500.7 +0.7 735 1.4 ZKSCAN1 POLR2G ZBTB33 CCNYL6 ZNF100 MTDHP4 lnc-ZNF43-2
GH19J021748 Enhancer 0.2 Ensembl 500.7 -1.8 -1844 0.2 CCNYL6 piR-58486 ZNF100
GH19J021019 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 12.9 -728.5 -728469 4.6 ZBTB40 ZNF217 EP300 SIN3A NRF1 POLR2G SP1 PHF8 ZFX POLR2A ZNF714 ZNF430 ZNF90 BNIP3P26 RPL7AP10 ZNF66 ZNF431 ZNF486 CCNYL6 BNIP3P16
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CCNYL6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CCNYL6 Gene

Genomic Locations for CCNYL6 Gene
chr19:21,750,745-21,753,438
(GRCh38/hg38)
Size:
2,694 bases
Orientation:
Plus strand
chr19:21,933,547-21,936,240
(GRCh37/hg19)
Size:
2,694 bases
Orientation:
Plus strand

Genomic View for CCNYL6 Gene

Genes around CCNYL6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCNYL6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCNYL6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCNYL6 Gene

Proteins for CCNYL6 Gene

Post-translational modifications for CCNYL6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCNYL6 Gene

Domains & Families for CCNYL6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CCNYL6 Gene

Function for CCNYL6 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCNYL6 Gene

Localization for CCNYL6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CCNYL6 Gene

Pathways & Interactions for CCNYL6 Gene

PathCards logo

SuperPathways for CCNYL6 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for CCNYL6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CCNYL6 Gene

Drugs & Compounds for CCNYL6 Gene

No Compound Related Data Available

Transcripts for CCNYL6 Gene

mRNA/cDNA for CCNYL6 Gene

2 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CCNYL6 Gene

No ASD Table

Relevant External Links for CCNYL6 Gene

GeneLoc Exon Structure for
CCNYL6

Expression for CCNYL6 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for CCNYL6

SOURCE GeneReport for Unigene cluster for CCNYL6 Gene:

Hs.680128
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCNYL6 Gene

Orthologs for CCNYL6 Gene

Evolution for CCNYL6 Gene

ENSEMBL:
Gene Tree for CCNYL6 (if available)
TreeFam:
Gene Tree for CCNYL6 (if available)

No data available for Orthologs for CCNYL6 Gene

Paralogs for CCNYL6 Gene

No data available for Paralogs for CCNYL6 Gene

Variants for CCNYL6 Gene

Structural Variations from Database of Genomic Variants (DGV) for CCNYL6 Gene

Variant ID Type Subtype PubMed ID
dgv511e201 CNV deletion 23290073
esv2718335 CNV deletion 23290073
esv2718343 CNV deletion 23290073
esv4924 OTHER complex 18987735
nsv1061327 CNV gain 25217958
nsv1063115 CNV gain 25217958
nsv578969 CNV loss 21841781
nsv578970 CNV loss 21841781
nsv7306 OTHER inversion 18451855
nsv833783 CNV loss 17160897
nsv833784 CNV loss 17160897
nsv961193 CNV duplication 23825009

Additional Variant Information for CCNYL6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCNYL6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for CCNYL6 Gene

Disorders for CCNYL6 Gene

No disorders were found for CCNYL6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CCNYL6 Gene

Publications for CCNYL6 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

No data available for Mastermind for CCNYL6 Gene

Products for CCNYL6 Gene

Sources for CCNYL6 Gene