Aliases for CCNQP1 Gene

Aliases for CCNQP1 Gene

  • CCNQ Pseudogene 1 2 3 5
  • Family With Sequence Similarity 58 Member B, Pseudogene 2 3
  • Family With Sequence Similarity 58, Member B, Pseudogene 2
  • Family With Sequence Similarity 58, Member B 2
  • Putative Cyclin-Related Protein FAM58B 3
  • Cyclin-Related Protein FAM58B 3
  • FAM58BP 3
  • FAM58B 3
  • CCNQP1 5

External Ids for CCNQP1 Gene

Previous HGNC Symbols for CCNQP1 Gene

  • FAM58B
  • FAM58BP

Summaries for CCNQP1 Gene

GeneCards Summary for CCNQP1 Gene

CCNQP1 (CCNQ Pseudogene 1) is a Pseudogene.

Additional gene information for CCNQP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CCNQP1 Gene

Genomics for CCNQP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CCNQP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J200206 Enhancer 0.8 Ensembl 0.4 -6.2 -6231 2.2 SP1 JUND RELA TCF12 IKZF2 EED ARID3A DPF2 RELB RUNX3 CCNQP1 lnc-CAMSAP2-5 NR5A2 ZNF281
GH01J200225 Enhancer 0.8 ENCODE 0.4 +12.9 12918 1.1 LEF1 IKZF1 JUND MTA1 ZNF24 DPF2 HDAC1 SOX6 FOXJ2 GATAD2B CCNQP1 HSALNG0009573 ZNF281 NR5A2
GH01J200247 Enhancer 1 UCNEbase Ensembl 0.3 +34.1 34069 0.8 ZNF629 ZNF600 ZNF561 SCRT2 ZBTB44 ZNF316 OSR2 ZBTB17 SCRT1 WT1 HSALNG0009573 CCNQP1 ZNF281 NR5A2
GH01J200241 Enhancer 0.9 ENCODE CraniofacialAtlas 0.3 +29.2 29152 1.8 RNF2 PKNOX1 POLR2A SP1 ZNF561 SCRT2 ZBTB44 MGA CEBPB ZSCAN5C HSALNG0009573 CCNQP1 ZNF281 NR5A2
GH01J200183 Enhancer 0.8 ENCODE 0.3 -29.0 -28971 0.8 CEBPG ZNF692 ZHX2 FOXA1 SP1 SCRT2 ZBTB44 CEBPB ZFX BMI1 DDX59 lnc-CAMSAP2-5 CCNQP1 NR5A2 ZNF281
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CCNQP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CCNQP1 Gene

Genomic Locations for CCNQP1 Gene
chr1:200,213,532-200,214,762
(GRCh38/hg38)
Size:
1,231 bases
Orientation:
Plus strand
chr1:200,182,656-200,183,643
(GRCh37/hg19)
Size:
988 bases
Orientation:
Plus strand

Genomic View for CCNQP1 Gene

Genes around CCNQP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCNQP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCNQP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCNQP1 Gene

Proteins for CCNQP1 Gene

Post-translational modifications for CCNQP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCNQP1 Gene

Domains & Families for CCNQP1 Gene

Suggested Antigen Peptide Sequences for CCNQP1 Gene

GenScript: Design optimal peptide antigens:
  • Putative cyclin-related protein FAM58B (FA58B_HUMAN)

No data available for Gene Families , Protein Domains , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CCNQP1 Gene

Function for CCNQP1 Gene

Phenotypes From GWAS Catalog for CCNQP1 Gene

Phenotypes for CCNQP1 Gene

genes like me logo Genes that share phenotypes with CCNQP1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCNQP1 Gene

Localization for CCNQP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CCNQP1 Gene

Pathways & Interactions for CCNQP1 Gene

PathCards logo

SuperPathways for CCNQP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CCNQP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CCNQP1 Gene

Drugs & Compounds for CCNQP1 Gene

No Compound Related Data Available

Transcripts for CCNQP1 Gene

mRNA/cDNA for CCNQP1 Gene

1 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CCNQP1 Gene

No ASD Table

Relevant External Links for CCNQP1 Gene

GeneLoc Exon Structure for
CCNQP1

Expression for CCNQP1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for CCNQP1

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCNQP1 Gene

Orthologs for CCNQP1 Gene

Evolution for CCNQP1 Gene

ENSEMBL:
Gene Tree for CCNQP1 (if available)
TreeFam:
Gene Tree for CCNQP1 (if available)

No data available for Orthologs for CCNQP1 Gene

Paralogs for CCNQP1 Gene

No data available for Paralogs for CCNQP1 Gene

Variants for CCNQP1 Gene

Additional Variant Information for CCNQP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCNQP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCNQP1 Gene

Disorders for CCNQP1 Gene

Additional Disease Information for CCNQP1

No disorders were found for CCNQP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CCNQP1 Gene

Publications for CCNQP1 Gene

  1. KIF14 is a candidate oncogene in the 1q minimal region of genomic gain in multiple cancers. (PMID: 15897902) Corson TW … Gallie BL (Oncogene 2005) 2 3
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for CCNQP1 Gene

Sources for CCNQP1 Gene