Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CCNQP1 Gene

Aliases for CCNQP1 Gene

  • CCNQ Pseudogene 1 2 3
  • Family With Sequence Similarity 58 Member B, Pseudogene 2 3 5
  • FAM58BP 3 5
  • Family With Sequence Similarity 58, Member B, Pseudogene 2
  • Family With Sequence Similarity 58, Member B 2
  • Putative Cyclin-Related Protein FAM58B 3
  • Cyclin-Related Protein FAM58B 3
  • FAM58B 3

External Ids for CCNQP1 Gene

Previous HGNC Symbols for CCNQP1 Gene

  • FAM58B
  • FAM58BP

Summaries for CCNQP1 Gene

GeneCards Summary for CCNQP1 Gene

CCNQP1 (CCNQ Pseudogene 1) is a Pseudogene.

Additional gene information for CCNQP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCNQP1 Gene

Genomics for CCNQP1 Gene

GeneHancer (GH) Regulatory Elements for CCNQP1 Gene

Promoters and enhancers for CCNQP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J200183 Enhancer 1 Ensembl ENCODE 0.3 -29.0 -29000 1.7 PKNOX1 CLOCK NFIB NEUROD1 MZF1 SIN3A FEZF1 BMI1 RAD21 ZNF335 DDX59 CCNQP1 LOC100420255
GH01J200152 Enhancer 1.5 FANTOM5 Ensembl ENCODE 0.2 -59.5 -59540 2.6 PKNOX1 SMAD1 ARNT ZNF766 CBX5 ZNF143 FOS JUNB REST ZNF592 ZNF281 LOC100420255 CCNQP1 NR5A2
GH01J200150 Enhancer 0.9 ENCODE 0.2 -62.8 -62756 0.9 ATF1 FOXA2 ARNT NEUROD1 IRF4 YY1 ZNF766 FOS ATF7 RUNX3 LOC100420255 CCNQP1 NR5A2
GH01J200180 Enhancer 0.6 ENCODE 0.3 -32.5 -32514 0.2 CTCF STAT1 RXRA JUN RAD21 SP1 JUND ATF3 SMC3 HNF4A RNU6-570P CCNQP1 LOC100420255
GH01J200178 Enhancer 0.5 ENCODE 0.3 -33.8 -33825 2.2 SP1 JUND ATF3 JUN FOSL2 FOS RNU6-570P LOC100420255 CCNQP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CCNQP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CCNQP1 Gene

Genomic Locations for CCNQP1 Gene
chr1:200,213,532-200,214,774
(GRCh38/hg38)
Size:
1,243 bases
Orientation:
Plus strand
chr1:200,182,656-200,183,643
(GRCh37/hg19)

Genomic View for CCNQP1 Gene

Genes around CCNQP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCNQP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCNQP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCNQP1 Gene

Proteins for CCNQP1 Gene

Post-translational modifications for CCNQP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCNQP1 Gene

Domains & Families for CCNQP1 Gene

Suggested Antigen Peptide Sequences for CCNQP1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for CCNQP1 Gene

Function for CCNQP1 Gene

Phenotypes From GWAS Catalog for CCNQP1 Gene

Gene Ontology (GO) - Molecular Function for CCNQP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IBA --
genes like me logo Genes that share ontologies with CCNQP1: view

Phenotypes for CCNQP1 Gene

genes like me logo Genes that share phenotypes with CCNQP1: view

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCNQP1 Gene

Localization for CCNQP1 Gene

Gene Ontology (GO) - Cellular Components for CCNQP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000307 cyclin-dependent protein kinase holoenzyme complex IBA --
GO:0005634 nucleus IBA --
genes like me logo Genes that share ontologies with CCNQP1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for CCNQP1 Gene

Pathways & Interactions for CCNQP1 Gene

SuperPathways for CCNQP1 Gene

No Data Available

Interacting Proteins for CCNQP1 Gene

Gene Ontology (GO) - Biological Process for CCNQP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity IBA --
GO:0045944 positive regulation of transcription by RNA polymerase II IBA --
GO:1901409 positive regulation of phosphorylation of RNA polymerase II C-terminal domain IBA --
genes like me logo Genes that share ontologies with CCNQP1: view

No data available for Pathways by source and SIGNOR curated interactions for CCNQP1 Gene

Drugs & Compounds for CCNQP1 Gene

No Compound Related Data Available

Transcripts for CCNQP1 Gene

mRNA/cDNA for CCNQP1 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CCNQP1 Gene

No ASD Table

Relevant External Links for CCNQP1 Gene

GeneLoc Exon Structure for
CCNQP1
ECgene alternative splicing isoforms for
CCNQP1

Expression for CCNQP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of CCNQP1 Gene:

CCNQP1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCNQP1 Gene

Orthologs for CCNQP1 Gene

Evolution for CCNQP1 Gene

ENSEMBL:
Gene Tree for CCNQP1 (if available)
TreeFam:
Gene Tree for CCNQP1 (if available)

No data available for Orthologs for CCNQP1 Gene

Paralogs for CCNQP1 Gene

No data available for Paralogs for CCNQP1 Gene

Variants for CCNQP1 Gene

Sequence variations from dbSNP and Humsavar for CCNQP1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs10919847 -- p.Thr236Asn
rs12028402 -- p.Gln48Arg

Additional Variant Information for CCNQP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCNQP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCNQP1 Gene

Disorders for CCNQP1 Gene

Additional Disease Information for CCNQP1

No disorders were found for CCNQP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CCNQP1 Gene

Publications for CCNQP1 Gene

  1. KIF14 is a candidate oncogene in the 1q minimal region of genomic gain in multiple cancers. (PMID: 15897902) Corson TW … Gallie BL (Oncogene 2005) 2 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3

Products for CCNQP1 Gene

Sources for CCNQP1 Gene

Content
Loading form....