Aliases for CCNJP2 Gene

Aliases for CCNJP2 Gene

  • Cyclin J Pseudogene 2 2 3 5
  • CCNJP2 5

External Ids for CCNJP2 Gene

Previous GeneCards Identifiers for CCNJP2 Gene

  • GC00U930789
  • GC01U902853
  • GC01P091342
  • GC01P093222

Summaries for CCNJP2 Gene

GeneCards Summary for CCNJP2 Gene

CCNJP2 (Cyclin J Pseudogene 2) is a Pseudogene.

Additional gene information for CCNJP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CCNJP2 Gene

Genomics for CCNJP2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CCNJP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J092755 Promoter/Enhancer 0.9 Ensembl ENCODE 250.7 +0.5 536 1.3 ATF2 CTBP1 MAFF ZNF316 MAFK ZBTB33 ATF4 ATF7 NRF1 EMSY CCNJP2 lnc-RPL5-2 RPL5 RNU4-59P SNORA66 SNORD21 EVI5 lnc-FAM69A-2 GFI1
GH01J092752 Enhancer 0.6 ENCODE 250.7 -1.9 -1869 2.7 JUND ATF2 FEZF1 PRDM6 REST ZNF384 SP7 PKNOX1 MZF1 GATAD2A CCNJP2 lnc-RPL5-2 EVI5 RPL5 RNU4-59P SNORD21 SNORA66 H3P3 lnc-FAM69A-2 GFI1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CCNJP2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CCNJP2 Gene

Latest Assembly
chr1:92,755,671-92,757,253
(GRCh38/hg38)
Size:
1,583 bases
Orientation:
Plus strand

Previous Assembly
chr1:93,221,228-93,222,810
(GRCh37/hg19 by Entrez Gene)
Size:
1,583 bases
Orientation:
Plus strand

chr1:93,221,351-93,222,513
(GRCh37/hg19 by Ensembl)
Size:
1,163 bases
Orientation:
Plus strand

Genomic View for CCNJP2 Gene

Genes around CCNJP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCNJP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCNJP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCNJP2 Gene

Proteins for CCNJP2 Gene

Post-translational modifications for CCNJP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCNJP2 Gene

Domains & Families for CCNJP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CCNJP2 Gene

Function for CCNJP2 Gene

Phenotypes From GWAS Catalog for CCNJP2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCNJP2 Gene

Localization for CCNJP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CCNJP2 Gene

Pathways & Interactions for CCNJP2 Gene

PathCards logo

SuperPathways for CCNJP2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CCNJP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CCNJP2 Gene

Drugs & Compounds for CCNJP2 Gene

No Compound Related Data Available

Transcripts for CCNJP2 Gene

mRNA/cDNA for CCNJP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CCNJP2 Gene

No ASD Table

Relevant External Links for CCNJP2 Gene

GeneLoc Exon Structure for
CCNJP2

Expression for CCNJP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CCNJP2 Gene

genes like me logo Genes that share expression patterns with CCNJP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCNJP2 Gene

Orthologs for CCNJP2 Gene

Evolution for CCNJP2 Gene

ENSEMBL:
Gene Tree for CCNJP2 (if available)
TreeFam:
Gene Tree for CCNJP2 (if available)
Alliance of Genome Resources:
Additional Orthologs for CCNJP2

No data available for Orthologs for CCNJP2 Gene

Paralogs for CCNJP2 Gene

No data available for Paralogs for CCNJP2 Gene

Variants for CCNJP2 Gene

Additional Variant Information for CCNJP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCNJP2
Leiden Open Variation Database (LOVD)
CCNJP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCNJP2 Gene

Disorders for CCNJP2 Gene

No disorders were found for CCNJP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CCNJP2 Gene

Publications for CCNJP2 Gene

No publications were found for CCNJP2 Gene.

No data available for Mastermind for CCNJP2 Gene

Products for CCNJP2 Gene

Sources for CCNJP2 Gene